Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01988 ATGCATGACCTGATACAAGAAATGGGTAGGGAAATTGTTCGTGAAGAATCTCCTAAAAATATCGGAGGACGCAGCAGATTGTGGGACCCTGAGGAAGTCTGTGATGTATTGACAAATAATACAGGAACTGATGCAATTGAAGGCATATGCTTAGATATGACTCAAATTCCATGTATAAATCTAAGCTCCGAAGCATTCAAAAAGATGCCAAACCTAAGGTTACTTGCTTTCGAAGCCCTCAATCGAGACTTTAAGAGAATCAATTCGGTGAACCTGCCAACGGGTCTTGCATTATTGCCTAAGAACTTGAGGTGTTTTGGGTGGAATTCATATCCATTGAAGTCTCTACCATCAACTTTTTGTCCTGAGAAGCTTATTGAGCTTTCCATGCCATACAGCAATGTCGAAAAACTTTGGAGTGGAGCACAGAAATTGTCGAGTTTAGAGAGAATTGACCTTGGTGAGTCCGCACACTTGATAGAGTGTCCAAATTTGTCCGGTGCCCCCAATCTTAAACATGTAATACTTGGCAAGTGTGAAAGCTTGCGTCAAGTTGATCCATCTATTTACACTCTGCCCAAGCTTGTGGAATTAGATGTGAGTGGATGCAAGTCGCTTCACAGCCTTTACAGCAGCACTTGTTCACCATCCTTGCGAAGATTTTACGCCTGGGGTTGCTCTAATCTCCAAGAGTTCATATTAATGCCCCCTAGTACCAGTGGTCCTTCTACAACTGATTTGTATTTAGAAGGGTCGTGTTTGAAGAATGAGCTTCCTTCATCAACTTTGCATATCAGAAATCTTGAAATCTTTTCTTCTCCCATTTGTGAGAGTCTTATGGATCTTCCTGAAAACTTTGCCTATCAAATCACACTTTCTGACTCAATGAAAAATGAACATGATACTTTGATCACCTTACATAAAGTACTACCTAGCTCTTGCTTCCGGTATGTAAGACGCCTATTTTTTATGGTGTGTCACACTTTATCTGAACTCCCAGACAACATCTCCTTGTTATCATCTTTAGAGTATTTATTAATAGTTCTCAGTGCTGTCAAAAGCTTGCCTGAAAGCATCAAGTATCTTCCACGACTCAAATTTCTTGAAGTTGGTGAATGTAAAATGCTTCAATCTATACCTGCGCTTCCACAATCCATTCAGTGCTTCTTTCTCTGGAACTGTGAGTCTCTTCAAAATGTTTTAACTTCATCCAGTGAACCACCCAAAATGTGCAACAACTGCACTTTGCTGCTTCCTAACTGCATAAATTTGGATCAACATTCATCTGATGCCATTTTGAAAGATGCCATTATTAGGATTGAACTTGGAGCAACACTACTGTTGACAGAAGTATTAGAAAACAAAGAAGATATATCCTTGGATCATGATGATAATTATTATAATGAGTTATATAATGATTTATATATTTCTAAAGCAGTAAGAAGTGGTAAGATTTGCTACTTGTTACCGGCTGCAAATGGCAAAGTTGGAGACTGGTTCCATTACAACTCTACACAAGCTTTGTTCACCACTGAACTTCCCCCTGATCATTTGGGTTTTGTTTTCTACTTAGTTCTTTCTCAAGTTCAGTCATACCACATTGGATACTGTGGCAGTTTTGGATGTGAATGCTACTTGGAAACTAGTTCGGGTGAAAGGATCTATATAAAAAGTTTCTTCGTAGATGAAAGTGTTGTGCTTAATCCTCATACTTTATTTGACATTAAGTCGGATCATGTATTTTTGTGGTATGATGCCCAATGTTGCAAGCATATAAGAGAAGCAATCAAAGAAATAAAAGCTAATGACAAGTGCACCACTCATAATCCAAAGCTTACATTTGAATTCTTTGCTCGAACTCAAAATAATGAGGAAGCTGTGATAAAAGAGTGTGGATTTCGTTGGATATATTCCTCAGAAGATCAAATTGTTGAGGAAGGAGAAGGATGTGTATCTGACGAGCAAGAAGAAACAGTTCCTCCAACAGAGAAATCCATGCAAAGTGTCTTTGGAACTCCGTCCAACTTGGAAGTAGAAGGAACAGAAGATTTGAGGCGTTCACTTGAAGAACTATTGCATATTGGATTTGGTGGAAACCTCATGCCTAATACAGAGGCGAATAGCTCCAATGATGATTGGTAA 2142 0.3889 MHDLIQEMGREIVREESPKNIGGRSRLWDPEEVCDVLTNNTGTDAIEGICLDMTQIPCINLSSEAFKKMPNLRLLAFEALNRDFKRINSVNLPTGLALLPKNLRCFGWNSYPLKSLPSTFCPEKLIELSMPYSNVEKLWSGAQKLSSLERIDLGESAHLIECPNLSGAPNLKHVILGKCESLRQVDPSIYTLPKLVELDVSGCKSLHSLYSSTCSPSLRRFYAWGCSNLQEFILMPPSTSGPSTTDLYLEGSCLKNELPSSTLHIRNLEIFSSPICESLMDLPENFAYQITLSDSMKNEHDTLITLHKVLPSSCFRYVRRLFFMVCHTLSELPDNISLLSSLEYLLIVLSAVKSLPESIKYLPRLKFLEVGECKMLQSIPALPQSIQCFFLWNCESLQNVLTSSSEPPKMCNNCTLLLPNCINLDQHSSDAILKDAIIRIELGATLLLTEVLENKEDISLDHDDNYYNELYNDLYISKAVRSGKICYLLPAANGKVGDWFHYNSTQALFTTELPPDHLGFVFYLVLSQVQSYHIGYCGSFGCECYLETSSGERIYIKSFFVDESVVLNPHTLFDIKSDHVFLWYDAQCCKHIREAIKEIKANDKCTTHNPKLTFEFFARTQNNEEAVIKECGFRWIYSSEDQIVEEGEGCVSDEQEETVPPTEKSMQSVFGTPSNLEVEGTEDLRRSLEELLHIGFGGNLMPNTEANSSNDDW* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01988 713 Gene3D Ribonuclease Inhibitor 32 239 IPR032675 -
Rops4g01988 713 Gene3D Ribonuclease Inhibitor 240 430 IPR032675 -
Rops4g01988 713 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 285 IPR044974 GO:0006952
Rops4g01988 713 SUPERFAMILY L domain-like 17 421 - -
Rops4g01988 713 Pfam Leucine Rich Repeat 124 143 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01988 Rops-Chr4 45711848 45714331 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01988 1 365 WRKY Transcription Factor Family AT4G12020 36.800 1.07e-45 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01988 - - lja:Lj3g3v2692950.1 1056.59