Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01987 ATGTGGACTGAATTTGACTTGATTGAAGACATCATCAAAGTGGTTTTACAGAAACTGAACCACAAGTACAAAAACGAATTTAGATGCCTGTTCATACCTGATGAAAACTATTCGGGCATTGAATCTTTAGTGAAAATTGATTCAGAAGATGTTCGAATAATTGGAATTTGGGGCATGGGAGGCATTGGTAAGACAACTCTTGCTGCTGCTATTTTTCATAAGTTCTCTTCCCAATACGAAGGTAGTTGCTTCTTAGAAGAATCAAACAGGCATGGAACCAATTACATATGCAACAGGCTTCTTTCTAAGTTACTAAGGGAAGATCTTGGCATTGACACTGCCAAAGTAATACCCTCGGCCGTCATGAGAAGACTAAGACGTATGAAAGCTTTCATTGTACTAGATGATGTGAAAACTTTAGAACTTCTAGAAAACTTGGTTGGAGTAGGACGTGACTGGCTAGGAGCTGGTAGCAGAGTCATTGTGACCACCAGAGATAAACATGTGCTTGTAACTGGAGGAGTTGACGAAATTCATGAAGTCAAGCAAATGAACTTTCAAAACTCACTCCGACTCTTCAGCTTGAATGCCTTTAAAAAAACATATCCCGAAAAGGGATATGAGGAGGTATCAAACAAAGCAATTGCTTATGCCAATGGCAACCCTTTAGCTTTGAAAGTTTTGGGATCGTTGCTTGTAAAAAAGAATGGGATAGTGCATTGGCTAAACTAA 732 0.3907 MWTEFDLIEDIIKVVLQKLNHKYKNEFRCLFIPDENYSGIESLVKIDSEDVRIIGIWGMGGIGKTTLAAAIFHKFSSQYEGSCFLEESNRHGTNYICNRLLSKLLREDLGIDTAKVIPSAVMRRLRRMKAFIVLDDVKTLELLENLVGVGRDWLGAGSRVIVTTRDKHVLVTGGVDEIHEVKQMNFQNSLRLFSLNAFKKTYPEKGYEEVSNKAIAYANGNPLALKVLGSLLVKKNGIVHWLN* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01987 243 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 235 IPR044974 GO:0006952
Rops4g01987 243 Gene3D - 16 173 IPR027417 -
Rops4g01987 243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 242 IPR027417 -
Rops4g01987 243 Gene3D - 184 243 IPR042197 -
Rops4g01987 243 PRINTS Disease resistance protein signature 124 138 - -
Rops4g01987 243 PRINTS Disease resistance protein signature 218 232 - -
Rops4g01987 243 PRINTS Disease resistance protein signature 53 68 - -
Rops4g01987 243 Pfam NB-ARC domain 41 241 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01987 Rops-Chr4 45710544 45711623 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01987 40 235 WRKY Transcription Factor Family AT5G45050 38.384 1.57e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01987 - - gmx:100783388 345.895