Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01955 ATGGCGTCCGAATTCTGCTTTGCATGGGATAATGGATGTGAATTAGATAAATCATTGAAATCTGAGTTAGAATTACGACGTCAAGCAGTTGCAACGTTGATTAACAAGAAAAGTGGTGACAGGGGACCCCAGACACATATACTGAATCAATGGCAAAACTGGAGTGATTGCATTCCGGGAGAAAATTGGCGAGGACAAAGCTCTTCGCAAATGGAATGGGAAAGATCGAGTGATTCAGCTCGTCAAGTAATTAAAGAAAACAAGGCTAAGGTGAGCGGGGGCCTATTAGAGAAAGAACCTGGTCTCAAAGAGATTCATTCTACCATTCCATTACAACTTCGTCTGTTACCTATTCGTGCTATGTTGCTTGTTGAGATTCACATGCCGCACAACAATGTTAAAGAACTTTGGCAGGGGATACAGGAACTTCATAATTTAAAGAGGTTTGACATAAGTGAATGCAAACAGTTAGTGAGGCTTCCAGATTTGTCAAAGGCGTCAAGACTTGAATGGCTTGATCTCTCTGGTTGTGAAAGTCTGTGTTGTCTTCCGGATTTGACTATGGCGCCAAGACTTCAATGGGTTGATATCTATGGTTGTAAAAGAGTTCCTCCGTTAATCTTGGAGGAGGGAGTGGAGTTGGATTCAGGACGTAGCTCAGCCTTGACATCAATTGAGACATCCGTTGAGGAGGAAAGCTGTGGTATAAGAAACCAGATACAGAATCAACGATGGGACTCGAGGGAACAGAGTTCCAGTGATAGTATTGACGAATCAGACTCAGAGATGGTCGAAGCAGATTCAGGTGAAGAAGGTAATGAGAGGAAAGACCATTATTCTGAGGGCATCAAATCTACTCGCAAGGAAACCAAGACCGTTCGCAGGCAGATCAGTATCACAGAGTCTATAAATGCGGCCTCAACCAGTTTTGAGCACAAATCAAAGCTTCAACAGTCATGGGACTCAATGAACTACGGTATGGGTCAAGAACACGACCTCCGGTACTAA 1008 0.4345 MASEFCFAWDNGCELDKSLKSELELRRQAVATLINKKSGDRGPQTHILNQWQNWSDCIPGENWRGQSSSQMEWERSSDSARQVIKENKAKVSGGLLEKEPGLKEIHSTIPLQLRLLPIRAMLLVEIHMPHNNVKELWQGIQELHNLKRFDISECKQLVRLPDLSKASRLEWLDLSGCESLCCLPDLTMAPRLQWVDIYGCKRVPPLILEEGVELDSGRSSALTSIETSVEEESCGIRNQIQNQRWDSREQSSSDSIDESDSEMVEADSGEEGNERKDHYSEGIKSTRKETKTVRRQISITESINAASTSFEHKSKLQQSWDSMNYGMGQEHDLRY* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01955 335 MobiDBLite consensus disorder prediction 296 317 - -
Rops4g01955 335 SUPERFAMILY L domain-like 115 201 - -
Rops4g01955 335 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 111 225 IPR044974 GO:0006952
Rops4g01955 335 Gene3D Ribonuclease Inhibitor 101 210 IPR032675 -
Rops4g01955 335 MobiDBLite consensus disorder prediction 233 249 - -
Rops4g01955 335 MobiDBLite consensus disorder prediction 268 295 - -
Rops4g01955 335 MobiDBLite consensus disorder prediction 233 317 - -
Rops4g01955 335 Pfam Leucine Rich Repeat 123 141 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01955 Rops-Chr4 45246427 45253476 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01955 110 203 WRKY Transcription Factor Family AT5G45050 37.234 1.25e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01955 - - adu:127739622 104.375