Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01947 ATGGGCCTATCTTCCTTAAAAGTACTGCATCTGGACGCTTGTTTCAACTTGTTCGAACTCCCCGACAACATCAATGCTTTATCATCGTTACATGAACTAAGGCTCGATGGAAGCATCGTTGAGAAGCTGCCTGCAAGCATCAAGCTTCTTGAAAATCTTGAGATTCTGTCTTTAGACCATTGCTTCATGCTTCGGTCTCTACCTGAGCTTCCACTATCAATCAATGTGCTTTATGCCATTAACTGTGCCTCGTTAGAGACGATATCCACTTTAGACACTTTTTCAGTCCACATGAAAGGAAAGTTGAAACGTATTTTGTTCAACAATGGAAAGACACTTAGCGAACACTCACTCCTCCGGATTATAGAAGACTCCCAGTTCACAGTGAAGAGCGCTGCATTGCATAATGTATTTGTAAGAACTTTCAGCATGGATACCCACAGCTATAATTATAACAGTGTTGGGGTTTGTTTACCAGGAAGTAGTGTCCCAGAGCATTTCGCATATCGAACCACAAAGTCCTCCATTACTGTTGAACTTCCTGGTCCTTACCGGTGTTCCGACTTGATAGGCTTCATCCACTGTGTAGTTTGTTTTCCACTCCGTGATATTCTGCATGGTGATAATATTGTAATCCGATGTTTTCAACATAATGGTATTGAAGTGGGATACACGACACCAAACCAGCACTGCTGGAGCCCCTCTGAAATGCTGTATTCGGATCATATTTATGTATGGTATGATCCATTCCATTGTGACTCTATTCTCAATCGTCGTGGACAAAATAAACCTTTTAAGTTTTGTGTTGGAACTGATAGTTGGAAACGTGATGGTCTGACTTTGCCCAAAGTGAAAGAGTTTGGGGTTCACCCAATATATGTCTCGGATTCAGAGCTTCACAGTTTCGTGCGGGAAGCAGCAGCCTCGAAATTGGAGATGGAGTTGAAGTTGGAGTTGGGAGTGAAGTTCCAATTGGTGGTGGACTTGCTGCAGGGATATAACTGGGAAAGCAGAGGCATAAGAAGCAAAACACAGCATCAAGAACAGAACTTTAGTGACCGCATTCCAGGAGAAAATTGGCGAAGACAAAGCTCTTCGCAAATGGAATGGGAAAGATGGAGTGATTCAGCTCATCAAGTAATTAAAGAAAACAAGGTTAAGGTGATCGGGGGCCTACTAGAGAAAGTACCTGCTTTCAAAGAGATTCATTCCACCATTCCATTACAACTTCGTCTATTACCTATTCGTGCTACGTTGCTTGTTGAGATTCATATGCCGTGCAACAATGTTCAAGAACTTTGGCAGGGGATACAGGAACTTCATAATTTAAAGAGGTTTGACATAAGTGAATGCAAACAGTTAGAAAGGCTTCCAGATTTGTCAAAGACGTCAAGACTTGAATGGCTTGATCTCTCTGCTTGTGAAAGTCTGTGTTGTCTTCCGGATTTGACTATGGCGCCAAGACTTCAATGGGTTGATATCTCTGGTTGTAAAAGAGTTCATCCATTAATCTTGGAGGAGGAGGGATTGGAGTTGGAATCAGGACGTAGCTCAGCCTTGACATCAATTGAGACACCCCATGAGGAGGAAAGCTGTGGTATGAGAAACCAGATACAGAATCAACGATGGGACTCCAGGGAACAGAGTTACAGTGATAGTATTGACGAATCAGACTCAGTGATGGTCGAACCAGATTCAGGTATAGAAGGTAATAAGAGGAAAGACCATTTTTCTGAGGGCATCAAATCTACTCGCAAGAAAACCAAGACCGGTTGCGGGCAGATCAGTATCACAAAATCTATAAATGCGTAA 1812 0.4255 MGLSSLKVLHLDACFNLFELPDNINALSSLHELRLDGSIVEKLPASIKLLENLEILSLDHCFMLRSLPELPLSINVLYAINCASLETISTLDTFSVHMKGKLKRILFNNGKTLSEHSLLRIIEDSQFTVKSAALHNVFVRTFSMDTHSYNYNSVGVCLPGSSVPEHFAYRTTKSSITVELPGPYRCSDLIGFIHCVVCFPLRDILHGDNIVIRCFQHNGIEVGYTTPNQHCWSPSEMLYSDHIYVWYDPFHCDSILNRRGQNKPFKFCVGTDSWKRDGLTLPKVKEFGVHPIYVSDSELHSFVREAAASKLEMELKLELGVKFQLVVDLLQGYNWESRGIRSKTQHQEQNFSDRIPGENWRRQSSSQMEWERWSDSAHQVIKENKVKVIGGLLEKVPAFKEIHSTIPLQLRLLPIRATLLVEIHMPCNNVQELWQGIQELHNLKRFDISECKQLERLPDLSKTSRLEWLDLSACESLCCLPDLTMAPRLQWVDISGCKRVHPLILEEEGLELESGRSSALTSIETPHEEESCGMRNQIQNQRWDSREQSYSDSIDESDSVMVEPDSGIEGNKRKDHFSEGIKSTRKKTKTGCGQISITKSINA* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01947 603 MobiDBLite consensus disorder prediction 532 547 - -
Rops4g01947 603 Gene3D Ribonuclease Inhibitor 1 109 IPR032675 -
Rops4g01947 603 Gene3D Ribonuclease Inhibitor 399 510 IPR032675 -
Rops4g01947 603 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 3 88 - -
Rops4g01947 603 MobiDBLite consensus disorder prediction 567 586 - -
Rops4g01947 603 MobiDBLite consensus disorder prediction 587 603 - -
Rops4g01947 603 MobiDBLite consensus disorder prediction 523 603 - -
Rops4g01947 603 Pfam C-JID domain 158 297 IPR045344 -
Rops4g01947 603 Pfam Leucine Rich Repeat 420 438 IPR011713 -
Rops4g01947 603 SUPERFAMILY RNI-like 3 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01947 Rops-Chr4 45115004 45116452 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01947 407 500 WRKY Transcription Factor Family AT5G45050 34.043 1.58e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01947 - - lja:Lj3g3v2666470.1 258.84