Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01937 ATGGTTGTTGTCCACCACCTCTTTTCCACACACTGGGGATCTTCACAAGGGCTAGGGCCATGGCTATCGGGGAGACCTGGAACACTTATGTGGAGGTTCCATTTTGAAGGGATATGGAAGGCTGTCAAAGGGTACCAGATTACCTACATGCCAGTGTCATCACCGCCCCTGTTGGTGGGGCATATACTACATGCTACTTCAGATTTTGAGATGAGGCTATTATGGTTTCCAAGTAGGTTAAGGTCAAAGGGAAGAAGCTGGCGCGAAACTATCAAAAATTGTGGGTATAGTAAGAGGACACGTCATGGTTCATCAGTATATATGGAAAAACAAATACCATTTATTGGGATATTAAGCAACAAAGCTGAGGAAATTCCATATTTTTCAGTGAAAATTCATTATTGTGATGGTGCATCATTTATAGGGGATAATCAACATCAGCCAGCAAGGTTATATCTCAGAGAGCAACGCATCTGGCAAGCTGCTATGGAAGACTTAATGTCAAAAGGGATGTGCTATGCCAAACGGACTCTTTTATCTGGATACTCTATAGGAGGCTTAGCATCTATACTGCATTGTGATGAATTTTGGGAATTGTTTCCTATAACCACAAGAGTAAAGTGCTTAAGTGATGCTGGATTATTCCTTGATGTTGTTGATGTATCTGGCCGTCGCAGTTTAAGGAATATATTCAGAAGTGTGGTCACCTTATAG 714 0.4174 MVVVHHLFSTHWGSSQGLGPWLSGRPGTLMWRFHFEGIWKAVKGYQITYMPVSSPPLLVGHILHATSDFEMRLLWFPSRLRSKGRSWRETIKNCGYSKRTRHGSSVYMEKQIPFIGILSNKAEEIPYFSVKIHYCDGASFIGDNQHQPARLYLREQRIWQAAMEDLMSKGMCYAKRTLLSGYSIGGLASILHCDEFWELFPITTRVKCLSDAGLFLDVVDVSGRRSLRNIFRSVVTL* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01937 237 PANTHER NOTUM-RELATED 82 237 IPR004963 GO:0016787
Rops4g01937 237 Pfam Pectinacetylesterase 83 237 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01937 Rops-Chr4 44879049 44881282 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01937 80 237 Carbohydrate Esterase AT3G05910 58.025 1.59e-60 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01937 K19882 - gmx:100791571 232.261