Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01936 ATGTCTTCTTCTGCCAAAAAGCACGATGTATTTCTTAGCTTCCGAGGTGAGGACACCCGATTCGGCTTCACCGGCCATCTTTATAATGCTCTGATTCAGAAACCAATCAACACATACATAGATTACCAGCTCAATAGAGGAGATGATGTTTGGCCCGCACTCGCCGAAGCAATCGAGGACTCTCATGTCTCCATTGTTGTTTTCTCAGAAAACTATGCGACTTCGAAATGGTGCTTGGAAGAACTCGTGAAAATACTTGAATGCAGAAAAGATCGGGGTCAGGTTGTCATACCTGTTTTCTATGAAACAGATCCGTCACACATAAGGAAGCAGACTGACAGTTACGAGAATGCATTCGCGAAACATGAGCGAGATCTTGGTGACGAAGACAGCAAATCCAAACAGAAAGTGTTGAAGTGGAAAGCTGCCCTCACTGAAGCGGCCAATATATCTGGATGGGACTCTCGAACCCATGAGGACGAATCTCACCTCATCGAGAACGTTGTCAATGATGTATGGCAAAAGATACACCTGAGGAACCCTACTGAACTGAAAGGCCTGGTGGGAACTGAAAGGCCTGGTAAGTCAACCATTGCTAAAGTCTTGTTTGCCAAGCTCTTCCCCCAATATGACAATGTCTGCTTCGTGGCCAATGCAAAAGAATATTCACCTGATAAGCTTCTCTTTGAGCTATTAAAGGAAGAAATTTCCAAATCTCTTGGAGGATCCATATTGGATATGAGGAGGCTCAATGGTAAAAAGGTTCTTGTTGTCCTTGATAACGTGGATAGTTCAGATCAAATAGAATATTTGTGTAGAGAGTATGGTGACCTAAGTCCTGATAGTAAACTCGTTATAACAACAAGATATAGGCAATTGCTTATTAAAAGAGTTGATTGGATATACAAGGTCAAGAAATGGAAAACTCCAGAATCTCTAAAGCTTTTCAGTTTAGAAGCCTTCCAGCAAAGCCATCCCCGAGAAGGTTACGAGGATCTCTCACAAAAGGCAGTTGATTATGCAGGGGGCGTTCCATTAGCTCTTAAAGTTTTGGGTTCATATCTTTGTGAGAGAAGTACGGAATTTTGGGAAAGTACCTTCAGAAAACTCAACATGTATCCTAATGAGACAATTCAAAAATTGTTAGAAGTTAGCTATGATGGATTAGATCATCTAGAGCAGAAGATATTTCTCGACATTGTATTTTTTTTCAAAGGAAAAAAGAAAGATCAGGCCATAAGGATACTAGATGCCTGTGGTTTCGAAGCAAGTAGTGGAATAGAACTCCTTAAAGACAAAGCTTTGATAACTATCTCAAATAGCAATAGAATACAGATTCATGACTTACTTCAAAAAATGGGTTTGGAAATAGTACGTAAAGAATGTGAAAGAAACCCTGGAGGACGCACCCGATTGAGAGATAGTGATGCTCGTGAAGTAATTGAAGAAAACAAGGGGACTGATTTAATTGAAGGCATAACGTTAGATTTGTCTCAAATTAAAGATTTACCATTGCATGCTGACACATTCACAAAGATGAAAGCCTTAAGATTTCTTCAATTCTATACCCCCTTGGGCCAGAGTTCTTGTAATACATACCTCAACCTTCCTAAAGTTCTTGAGCCATTTTCTGACAAATTGAGATATTTTGAGTGGAGTGGATACCCTTTTGAGTATCTTCCATCAACTTTCTGTGCTAAGTTGCTGGTTGAGATTCGCATGCCCCGCAGCAATGTTAAAGAACTTTGGCAGGGGATACAGGAACTTCATAAATTAGAGGGAATTGACCTAAGTGAATGCAAACACTTTAGAAGGCTTCCGGATTTGTCCAAGGCGTCAAGACTTAAATGGGTTAATCTCTCCGGTTGTGTAAGTCTGTGGAGTCTTCATCCATCTGTTTTATCCTCCGACACACTTGTTACTTTGATACTGGATAGGTGTACAAATCTTAGGTCGGTTAAAGGTGAGAAACATTTAAAATATCTAGAGAAGATCAGTGTAAACGGCTGCTTAAATCTCCAGGAATTTTCAGTGTCTTCTGATTTGATTGAAAACTTGGATTTAAGCAATACAGGAATCCAAACATTGGATGCATCAATTGGGCGTCTACACAATCTTAAGTGGCTTAATCTAGAGGGTTTAAGACTCAGGCATCTTCTAAAGGAGTTATCTTGCCTGACATCTCTTAAGGAGCTGAGGCTTTCTAACAGTGTACTAGTAATTGACAAAGAGCAGCTACATGTCTTGTTTGATGGCTTACGATCCCTACAAATACTACATTTGAAGGACTGTAGTAACTTGTATGAACTCCCCGACAACATCAGTGTCCTATCACAATTACAGGAATTAAGGCTAGATGGAAGCAATGTGAAAAGGTTGCCCGAAAGCATCAAGCATCTTCAAGAACTGGAAATTCTGTCCTTGGAGAATTGCAAGGAGCTTCTGTGTCTCCCAGAGCTTCCACCCCTGGTCAAACTGTTGCGTGTCGTTAACTGCAAGTCATTGGTGACAGTGTCAAATTTAAAGACTTTGGCAACAAAGATGATAGGAAAGGCCAAACACGTTTCATTTAAGAATAGCTTGAAATTGGAGAGGGATTCACTCTATGGTATAATGGAAAGCCTCCATTTAACAATGATGAGTGCTGCAATTCACAATGTGTTAGTAAGAAGACACGATGTGGACATGCACAGCTACAACTATACCGCCATTCAGGTTTGTTTACCGGGAAGAAGGTTCGCGGGGCAGGTCAAATATCGAACAACTAAGTCCTCCTCCATTACCATTAAACTTCCCAACCGTTCCAACTTGTTGGGCTTCATTTACTACGTGGTTCTTACTCCAGCAGGCGGAATGACGAATATTGGCACTATGATAAACTGTCAATGCCGCTTGAAAGAAGGTAGAAGGCTAACATGGCTAGATACTGATATCACAGAACTGAACTCGGATCATGTTTGCGTTTGGTATGATCCGTTCCACTGTGACAGCATTCTCAAATTTTATGAACCAACCGTTTGTTTTGAGTTCTATGTTGCAAATGATGCGAGAGAAGTTGATGGTTCAATCCGTATTAGTGAATGTGGGGTACGCCCTGTAAAGGTTTCAGAATTGCAGAGTGTTTTACCGAAATTGGACTTGGATTCGGATAAGAAAAAGGACTTGGAGAATGCAGTGGAATTGGAAAGCAATGGTATAAGAAACCAGATACAGAATCAACCATGGGACTCGAGTGAACAGAGTTCCAGTGATAGTATAGACGAATCAGACTCAGAGACGATCGAAACGGATTCAGCCGAAGAAGGTAATGGGAGGAAAGATCATTATTCTGACATGAAAGATGGCATCAAATCTCACGAGCAAATCAGTATCACAGATTCCACAAATGTGGTCCAGAGCAAAGGAAACGAAGGAAAGATCACTGAATCTGATGCTGGATTGCATATACCCGCAGTCTCAATTGATGAAGAAAATGCTTTGAAGGACAAGTTAAGTGAAAACAACTACGATGGGCCGGATAATGTTGAAGAGACCAAGCATTCGGAAGAAAATCAAAATCATGAAGGTGAAGATGGATCAGATTCAGATGAGGACCCATTTGCTGAACTTGAGAGCATCCTGTTGGGAAGTCCAAAATCATCGGCAAAAGCAACATGTTCCAAAAGCGATTTTGCTATAAGAGAAGCTTTGCATAACCTTAAATGCCTATTGGAAAACTCACTTGAGTCCATTCTGGGTGACGTGGAACTACAACGACAGTTGCACATGTCTTTGGAATGCATACAAGAAGCAACCGAGGAAGAGGTTTCTCCTGATGTTGCTAAGTTGGTTGGAAGCATGACATCCTCCTCTATTGAGGATCTGTTCAAAGACTTTCTCTGGACTCAAAAAGTTGCGGAAGTTCACACCAGCCATTTGCAACAAAAAGAAGAGCTTAAGCGGCAAACGAGAGATGCTAAGAAACAGAGAAAATTAGTGGAGAAAAAAAAGAGTCAATATGAGGATGAAACCAAATGTCTTGATGAAGAGGCAAAAAAGCTGGATGAAAAAATTCGACTTCTTGTTGAACAAAAGAAAACTGTCGCGTTGGAAAAAAACAAGTTGAAGGAGACCATGGATAGATGTGAGGATGAAAAGAAGAAACTGGAAGATGAAGCCAAGAACATAATAACTGAAAGCAAAGAGCTAATGTCTGCGATTAAGGTTTCTAAATCCTCATATACTGCTGCCCTGTCAAAGCAGCACCAGTTGAATAACATATGGGAAGGAGGTGATTTTGTTTACCCTCCTAGTTTTGATCTTTTGCTAGAGAAGTCATTCCTCTTTAAAGTTGAAGTCAAGCAATCTACCAACAACCGATTTGAACCATCCTTCAAGGTTATCAAGTTATGTACTGATTCTACCATCATATCAAATTTTAGGCAAACTGATCAAACTATATATGGAACTGAGTTTAAGGAAAGTTGTGGGTTGTCTAATGAAGAGTTCAAGTTCACTCCTGATTCAAAAGATGATGAAAATATTGTTTCTAAGGAATTGATTATCTGTGATGAGACTAAGGAAAATTTTGATTCTACTCCTGGAAATTGGTCTGCTGATAATGACCTTCCAAAAGATGAATTTTCTTCATCCAAGCTGAAGAAAGTCAAAATAGAGAATACTGAAGAAGATATTTGA 4677 0.4013 MSSSAKKHDVFLSFRGEDTRFGFTGHLYNALIQKPINTYIDYQLNRGDDVWPALAEAIEDSHVSIVVFSENYATSKWCLEELVKILECRKDRGQVVIPVFYETDPSHIRKQTDSYENAFAKHERDLGDEDSKSKQKVLKWKAALTEAANISGWDSRTHEDESHLIENVVNDVWQKIHLRNPTELKGLVGTERPGKSTIAKVLFAKLFPQYDNVCFVANAKEYSPDKLLFELLKEEISKSLGGSILDMRRLNGKKVLVVLDNVDSSDQIEYLCREYGDLSPDSKLVITTRYRQLLIKRVDWIYKVKKWKTPESLKLFSLEAFQQSHPREGYEDLSQKAVDYAGGVPLALKVLGSYLCERSTEFWESTFRKLNMYPNETIQKLLEVSYDGLDHLEQKIFLDIVFFFKGKKKDQAIRILDACGFEASSGIELLKDKALITISNSNRIQIHDLLQKMGLEIVRKECERNPGGRTRLRDSDAREVIEENKGTDLIEGITLDLSQIKDLPLHADTFTKMKALRFLQFYTPLGQSSCNTYLNLPKVLEPFSDKLRYFEWSGYPFEYLPSTFCAKLLVEIRMPRSNVKELWQGIQELHKLEGIDLSECKHFRRLPDLSKASRLKWVNLSGCVSLWSLHPSVLSSDTLVTLILDRCTNLRSVKGEKHLKYLEKISVNGCLNLQEFSVSSDLIENLDLSNTGIQTLDASIGRLHNLKWLNLEGLRLRHLLKELSCLTSLKELRLSNSVLVIDKEQLHVLFDGLRSLQILHLKDCSNLYELPDNISVLSQLQELRLDGSNVKRLPESIKHLQELEILSLENCKELLCLPELPPLVKLLRVVNCKSLVTVSNLKTLATKMIGKAKHVSFKNSLKLERDSLYGIMESLHLTMMSAAIHNVLVRRHDVDMHSYNYTAIQVCLPGRRFAGQVKYRTTKSSSITIKLPNRSNLLGFIYYVVLTPAGGMTNIGTMINCQCRLKEGRRLTWLDTDITELNSDHVCVWYDPFHCDSILKFYEPTVCFEFYVANDAREVDGSIRISECGVRPVKVSELQSVLPKLDLDSDKKKDLENAVELESNGIRNQIQNQPWDSSEQSSSDSIDESDSETIETDSAEEGNGRKDHYSDMKDGIKSHEQISITDSTNVVQSKGNEGKITESDAGLHIPAVSIDEENALKDKLSENNYDGPDNVEETKHSEENQNHEGEDGSDSDEDPFAELESILLGSPKSSAKATCSKSDFAIREALHNLKCLLENSLESILGDVELQRQLHMSLECIQEATEEEVSPDVAKLVGSMTSSSIEDLFKDFLWTQKVAEVHTSHLQQKEELKRQTRDAKKQRKLVEKKKSQYEDETKCLDEEAKKLDEKIRLLVEQKKTVALEKNKLKETMDRCEDEKKKLEDEAKNIITESKELMSAIKVSKSSYTAALSKQHQLNNIWEGGDFVYPPSFDLLLEKSFLFKVEVKQSTNNRFEPSFKVIKLCTDSTIISNFRQTDQTIYGTEFKESCGLSNEEFKFTPDSKDDENIVSKELIICDETKENFDSTPGNWSADNDLPKDEFSSSKLKKVKIENTEEDI* 1559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01936 1558 MobiDBLite consensus disorder prediction 1164 1198 - -
Rops4g01936 1558 FunFam Disease resistance protein (TIR-NBS-LRR class) 4 178 - -
Rops4g01936 1558 MobiDBLite consensus disorder prediction 1164 1188 - -
Rops4g01936 1558 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 400 IPR027417 -
Rops4g01936 1558 MobiDBLite consensus disorder prediction 1083 1097 - -
Rops4g01936 1558 PRINTS Disease resistance protein signature 341 355 - -
Rops4g01936 1558 PRINTS Disease resistance protein signature 798 814 - -
Rops4g01936 1558 PRINTS Disease resistance protein signature 249 263 - -
Rops4g01936 1558 PRINTS Disease resistance protein signature 184 199 - -
Rops4g01936 1558 Coils Coil 1302 1399 - -
Rops4g01936 1558 MobiDBLite consensus disorder prediction 1062 1082 - -
Rops4g01936 1558 SMART till_3 7 150 IPR000157 GO:0007165
Rops4g01936 1558 SUPERFAMILY L domain-like 447 829 - -
Rops4g01936 1558 ProSiteProfiles TIR domain profile. 6 176 IPR000157 GO:0007165
Rops4g01936 1558 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 153 IPR035897 -
Rops4g01936 1558 Gene3D - 308 390 IPR042197 -
Rops4g01936 1558 MobiDBLite consensus disorder prediction 1098 1120 - -
Rops4g01936 1558 Pfam TIR domain 7 181 IPR000157 GO:0007165
Rops4g01936 1558 MobiDBLite consensus disorder prediction 1060 1144 - -
Rops4g01936 1558 Gene3D Ribonuclease Inhibitor 682 862 IPR032675 -
Rops4g01936 1558 Gene3D Ribonuclease Inhibitor 471 681 IPR032675 -
Rops4g01936 1558 Pfam NB-ARC domain 166 388 IPR002182 GO:0043531
Rops4g01936 1558 Gene3D - 4 181 IPR035897 -
Rops4g01936 1558 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 677 IPR044974 GO:0006952
Rops4g01936 1558 MobiDBLite consensus disorder prediction 1121 1139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01936 Rops-Chr4 44835688 44859831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01936 3 783 WRKY Transcription Factor Family AT4G12020 29.880 3.75e-76 278