Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01926 ATGCATGATTTGCTACAAATCATGGGTTTGGATATAGTTCGACAAGCTGGAAGACGTAGCCGATTGGAGCATATTGAAGAAGTTTGGGATGTACTTGAAAATAACAAAGGAACCGATGCAGTTGAAGGCATAACATTAGATTTGTCTCAAAAAGTAGATTTACACTTACAAGCTGAGACATTCCACATGATGCCTAAATTAAGATTTCTTAGATTATATGTCCCCTTGGGTAAGAAGAGATCAGCTAATGTTTACCTTCCTAGATTCCTCAAGCCATGTTGGGATAAATTGAGGTACCTTGAGTGGAATGGATACCCTTTGAAGTCTCTTCCACAAAATTTTGTGCTAAGTTTCTTGTTGAGATTCGCATGCCGCACAGTCATATTCAAGAACTTTGGCAGGAAACACAGTTGTCTGCAGAAGCTCAATGTCGATGATTGTTCAAGCCTCAAGGAATTTTCAGTGTCGTCCGATTCAATTGAAAGGCTGGATTTAAGAAAGACTAGAGTAGAAAAATTAGACTCGTCAATCGGTCGTCTAAGCAAGCTTAAGAGCCTCAATCTAGAAGGATTATGCCTACAGAATCTACCAGATGAGTTATCATGCCTGAAATCTCTTAAGGAGTTTAGGATATCTAACTGTGAACCAGTTAACAAAAAGAAGCTACATGTCCTATGTAACGGATTACTATCCTTAAAATTACTGCATTTGAAGGATTGTTATAAGTTGTTTGAACTCCCTGACAACATCAACGCCTTATCATCATTATATGAATTAAGGCTCGATGGAAGCAGTGTTGAAAAGTTGCCTATAAACATCAAGTTTCTTGAAAATCTGGAGATTCTGTCCTTAGAGAATTGTAGGAAGCTTCAGACTCTACCTGAGCTTCCACAGCTAATCAAAGAGCTTTATGCCGTCAACTGTACCTCATTAGTGACGGTATCCACTTTAAAGACTTTTTCAGTCAAGATGAAAGGAAAGAAGAAACACATTTCATTTAAGAATGGAATGAGATTGAATAAATTGTCACTCCTCAGGATTCTGGAAGGCGCCCAGTTCATAATGAAGAGTGCTGCAGTGCAAAATGTATTTGTAAGAAGGTTCGGTGTGAATACCCACAACTATAATTATAACAGTGTTGGTGTTTGTTTAGCAGGAAGTAGTGTCCCAGAGGGGTTCACTTATAGAACCGCAGAGTCCTCAATTACCATTGAACGTCCTAGTTGTGACCATCATTCCCATTTGCTAGGCTTCATTTACTCGGTGGTTCTTTCTCCATCCTGTGCAATGGGGCAGTGTGAAGCTAAAATCCAATGTTTGCGAGATGGTAGAGAGGTGGGATATGCGACAACGTGGCATCACAATGCCATCAAGGAATTGAATTCGGATCATGTTTTTGTATGGTATGATCCATTCCATTCTGACTTAATTCTCAACGATTTTGGACGAAATGAACCTCTCGAGTTACGTGTTATAATTGCTAGTGGGGAAGGTAAAGGCCTGATCCATCTGAAAGAGTTTGGGATCCATTTAATATGCATATCAGATTCAGAGCTTCCTAGTTACTTGTGGGAAGCAAAAGACTTGGAATTAGAGTTGAGGTTGGAGTTGGGATTAAAGTTCCAATTGGCATTGGACTTTCTGCAAGGATACAATCAATATGATTGTGAAGTGGCATTCAAATTATTCCTTGCATTGGAGAATGGAGACGAATTGGATGATAGATTAAAATTAGAGTTCGAACCACGATGTAGAGCAATTTTAACATTAATTGAGAATGAACCTAATGGCACAAGAACCCAGATACAGGATCAACGACAAAACTTGAGTGACTACATTCTTGCTCATGAAGGAACTGAGAAAGTGAAGCTGGCCAGATCCACAATGTTGACCACTGAGTTTGAGACCTTTCAAATGAAGAAAGGAGAGACCATTGAGGAGATGTTTAGCAGGCTCATTGTAATAACAAATGAACTAAAAACTCTTGGCAATCCAGTGAGCACACTGAACAAAATCTTGAAAATTTTAAAGAGCCTCCCTAATAAGTGGGATGCTAAGGTTTCTGTCATTGAGGAAGCTAAGCACTTACCCTCATTAGAGTTGGATGAGCTTATAGGAATACTAATGCCTGACTGTCCAGAGCTGAGGAAAACTCAAAAGAAGCCTATTAATAAAGGTAAAAAGAAAGCCATGATGGCAACCTGGGATAATTCAAAAGAAGAAGATGAAGAATCTCAAGAGGAAACTACCAACTTGTGTTTGATGGCTGATACTGATGAGGAAGAGGAGGTAAGTGACTCTGAACCTGAACTCACTTATTCTGAGTTAAAAGATGCTTTTGTTAACCTACTCAATGAATCCAACTTGCTGGTTTCAAAACTTCCTGCTTTGAAAGGTCAAAATAATTCCTTAAAAAATGACTTAGCCAAGTTTGTCAATAGCTCACAAAATTTAGACAAGTTATTCAGCAGCCAAAAAGGAGTTTTGGACAAAGCTGGCCTTGGGTATAAGAAATCCACAAATGAAGTGTGGTACAAAAGTTTCTTTGTTCTTGAAAAGGAAAGAAACAACAAATGTTTTAAATGCATGAAAACTGCTTATGATATAGTTTTATGTCCTATAGGCAAAAGAGCCAAGAGAAATGTTCCTAATAGTAAAGGACCCAAATTGACTTGGATACCTAAAGATATCTTACCTTCTGACACAAGTTTGCCTAGTAGCAACAAGAAGAAAATCAGAGTGGTATCTAGACAGTGGCTCCTCCAGGCATATGACAAGAGAAAGAAATTTGTTCCTAACACTAGAACTTGTTGA 2814 0.3852 MHDLLQIMGLDIVRQAGRRSRLEHIEEVWDVLENNKGTDAVEGITLDLSQKVDLHLQAETFHMMPKLRFLRLYVPLGKKRSANVYLPRFLKPCWDKLRYLEWNGYPLKSLPQNFVLSFLLRFACRTVIFKNFGRKHSCLQKLNVDDCSSLKEFSVSSDSIERLDLRKTRVEKLDSSIGRLSKLKSLNLEGLCLQNLPDELSCLKSLKEFRISNCEPVNKKKLHVLCNGLLSLKLLHLKDCYKLFELPDNINALSSLYELRLDGSSVEKLPINIKFLENLEILSLENCRKLQTLPELPQLIKELYAVNCTSLVTVSTLKTFSVKMKGKKKHISFKNGMRLNKLSLLRILEGAQFIMKSAAVQNVFVRRFGVNTHNYNYNSVGVCLAGSSVPEGFTYRTAESSITIERPSCDHHSHLLGFIYSVVLSPSCAMGQCEAKIQCLRDGREVGYATTWHHNAIKELNSDHVFVWYDPFHSDLILNDFGRNEPLELRVIIASGEGKGLIHLKEFGIHLICISDSELPSYLWEAKDLELELRLELGLKFQLALDFLQGYNQYDCEVAFKLFLALENGDELDDRLKLEFEPRCRAILTLIENEPNGTRTQIQDQRQNLSDYILAHEGTEKVKLARSTMLTTEFETFQMKKGETIEEMFSRLIVITNELKTLGNPVSTLNKILKILKSLPNKWDAKVSVIEEAKHLPSLELDELIGILMPDCPELRKTQKKPINKGKKKAMMATWDNSKEEDEESQEETTNLCLMADTDEEEEVSDSEPELTYSELKDAFVNLLNESNLLVSKLPALKGQNNSLKNDLAKFVNSSQNLDKLFSSQKGVLDKAGLGYKKSTNEVWYKSFFVLEKERNNKCFKCMKTAYDIVLCPIGKRAKRNVPNSKGPKLTWIPKDILPSDTSLPSSNKKKIRVVSRQWLLQAYDKRKKFVPNTRTC* 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01926 937 SUPERFAMILY L domain-like 46 304 - -
Rops4g01926 937 Gene3D Ribonuclease Inhibitor 26 351 IPR032675 -
Rops4g01926 937 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 94 216 - -
Rops4g01926 937 Pfam gag-polypeptide of LTR copia-type 621 709 - -
Rops4g01926 937 Pfam C-JID domain 385 516 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01926 Rops-Chr4 44629917 44638191 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01926 1 325 WRKY Transcription Factor Family AT4G12020 31.378 1.63e-20 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01926 - - lja:Lj3g3v2666470.1 456.832