Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01924 ATGAAATATGAGGTCAAGAAATGGGAGTTCCCAGAATCTCTTAATCTTTTTAGCTTAGGAGCCTTCGACCAAAGTCATCCTAAAGAGGGTTATGAGCATCTCTCAAAAAGGATAGTTGCATATGCAGGAGGCGTTCCATTAGCTTCGAAAGTTTTGGGTTTGCATTTTCGTTCCAGAAATATTGAATTCTGGGAATCTGAATTGAGTTATTTCGAGAGCAAAAAGGAATTCTTTAAGGAAATCGGAGAAGTGTTAGAAGCAATATTTCTGGACATCGCATTCTTTTTCAAAGACGAAAATAAAGATTTTGTCATAAGGATACTAAATGCCTGTGATTTCAATGCTGTTAGTGGAATAGAGGTCCTCAAAGATAAAGCTCTTATAACTATTACAAACACCAATAGGATACAAATGCATGACTTGTTACAAGAAATGGGTATGGATCTAGTTCGAAAAGATTTTAGAAGAGACCCTGGTCGACGTTGCCGATTGGAGCATATTGATGAAGTTCGTGATGTACTTGAAAATAACAGGGGAACTGATGCAGTTGAAGGCATAACATTAGATTTGTCTCAAAAAGTAGATTTACATTTGCGAGCTGACACATTCAACATGATGGTTAGATTAAGATTTCTTAGATTATACGTCCCCTTGGGTGAGAAGAGATCAGTTAATGTGTACCATCCTAGATTCCTTAAAAAATGTTCTGATGAATTGAGATATCTTGAGTGGAACGGATATGCTTTGCAGTATCTTCCACCAAAATTTTGTGCAAAGTTTCTTGTTGAGATTCACATGCCGCATAGTCATATTAAAGAACTTTGGCAGGGGACGCAGGATCTTGTGAATTTAGAGACAATTGACCTAAGTGAATGCAAGCAGTTGATGAAGCTCCCTGATTTGTCTAAGGCGTTAAAACTTAAATGGGTGTATCTATCCGGATGTGCAAGTTTGTATGTTCTTCATCCCACCCTTTTATCTGTGGATACACTTGAAACTTTGGTACTGAATAGGTGCAAGAGACTGAAAAGTCTTAAAAGCCAAAAACACTTTAGCTGTCTACAGAAGCTAAATGTCGATGACTGTTCAAGTCTTAAAGAATTTTCAGTGTCGTCGGATTCAATTGAAATGTTGGATTTAAGTAAGACGGGAGTCAACAAATTGAACTCATCAATCGGTCGTCTAAGCAAGCTAGTGTGGCTCAATCTAGAAGGATTAAGACTACAGGATCTTCCAGATGAGTTATCATGCTTGACATATCTTGAGGAGCTTAGGATATCTAATTGCAGACCAGTTAACAAAAAGAAGTTACATGTCCTATTCCAGATGAAAGGAAAAGAGAAACACATTTCGTTTAAAAATGGAAAGAAACTGAATGAAATGTCACTCCTCCAGATTATGGAAGATGCTAAGTTCACAATGAAGAGTGTTGTATTGCACAATGTATTTGTAAGAAGATTCAGTGTGGATACCCACAGCTATAATTATAACAGTGTTGGGGTTTGCTTACCAGGAAGTAGTGTCCCAGAGGGGTTCACACGTAGAACCACAGGGTCCTCCATTACCATCGAACTTCCTGATCGTGACCAACGTTCTCACTTGCTAGGCTTCATTTACTCTATGGTTCTTACTCCATCCCATACAATGGGGCAGTGTGAAGCTAAAATCCAATGTTTTCAAGATGGTAGAGAGGTGGGATACGCGACAACATGGCATCACAATGCCATCAGGGAATTGGATTCAGATCATGTTTTTGTGTGTGGGGAAGGTGAAGGCCTGATCCATATGAAAGAGTTTGGGGTACACCTAATATGTTTCTCAGATTCAGGGTTTCACAGTTTCTTGCAGGAAGCAGAGGACTTGGAATCTGAGTTGAGGTTGGGGTTGGGATTGAAGTTCCAATTGGCATTGGACTTGCTGTTGGGATATAATCGGGAAGCGGCATCAAAATTATGCCTTGCCTTGGAGAATGGATATGAATTGGATGATAAATTGAAATTAGAGTTTGAATCACGATGTCAAACAGTTTTAACTGTAATTGAGAATCAGAGCAATGACATAAGGACCCAGATATAG 2076 0.3892 MKYEVKKWEFPESLNLFSLGAFDQSHPKEGYEHLSKRIVAYAGGVPLASKVLGLHFRSRNIEFWESELSYFESKKEFFKEIGEVLEAIFLDIAFFFKDENKDFVIRILNACDFNAVSGIEVLKDKALITITNTNRIQMHDLLQEMGMDLVRKDFRRDPGRRCRLEHIDEVRDVLENNRGTDAVEGITLDLSQKVDLHLRADTFNMMVRLRFLRLYVPLGEKRSVNVYHPRFLKKCSDELRYLEWNGYALQYLPPKFCAKFLVEIHMPHSHIKELWQGTQDLVNLETIDLSECKQLMKLPDLSKALKLKWVYLSGCASLYVLHPTLLSVDTLETLVLNRCKRLKSLKSQKHFSCLQKLNVDDCSSLKEFSVSSDSIEMLDLSKTGVNKLNSSIGRLSKLVWLNLEGLRLQDLPDELSCLTYLEELRISNCRPVNKKKLHVLFQMKGKEKHISFKNGKKLNEMSLLQIMEDAKFTMKSVVLHNVFVRRFSVDTHSYNYNSVGVCLPGSSVPEGFTRRTTGSSITIELPDRDQRSHLLGFIYSMVLTPSHTMGQCEAKIQCFQDGREVGYATTWHHNAIRELDSDHVFVCGEGEGLIHMKEFGVHLICFSDSGFHSFLQEAEDLESELRLGLGLKFQLALDLLLGYNREAASKLCLALENGYELDDKLKLEFESRCQTVLTVIENQSNDIRTQI* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01924 691 Gene3D Ribonuclease Inhibitor 165 474 IPR032675 -
Rops4g01924 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 87 IPR027417 -
Rops4g01924 691 Pfam C-JID domain 503 605 IPR045344 -
Rops4g01924 691 SUPERFAMILY "Winged helix" DNA-binding domain 79 153 IPR036390 -
Rops4g01924 691 PRINTS Disease resistance protein signature 42 56 - -
Rops4g01924 691 PRINTS Disease resistance protein signature 279 295 - -
Rops4g01924 691 Pfam Leucine Rich Repeat 260 279 IPR011713 -
Rops4g01924 691 SUPERFAMILY L domain-like 188 431 - -
Rops4g01924 691 Gene3D - 10 92 IPR042197 -
Rops4g01924 691 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 433 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01924 Rops-Chr4 44579784 44582697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01924 3 429 WRKY Transcription Factor Family AT4G12020 34.014 1.90e-51 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01924 - - lja:Lj3g3v2666470.1 553.132