Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01908 ATGGCGCACCACGATCACGAAACAGGATCCGATCCGAAGCACCAAACCCGACTCTACAACCCATACAAGGACCTCGAGGTTCCCATCCGAAACCTCTACCAACTCCCAACCTCCCCGGAGTACCTCTTCGACGAGGAAGCTCGCCGGAAACGCCGTTCCTGGGGAGAAAATCTCACCTTTTACACCGGCTGCGGCTACCTTGGTGGAGCCATCACCGGCGCCGGTGTAGGCCTTGTCGATGGCGTCAAATCATTCGAGTCCGGCGACACCGCGAAGCTCCGAATCAACCGCGTGCTGAACTCCTCCGGACATTCGGGTCGGGCGTGGGGAAACCGGGTCGGGATAATCGGGTTGATCTACGCCGGAATCGAGAGCGGGGTCGAGGCAGCGAGGGACGCTGACGACGTTTGGAACAGCGTGGCGGCAGGGCTTGGCACTGGCGCTCTTTATCGGGCGGCGAGAGGGGTGAGATCCGCCGCGGTCGCCGGAGCTGTCGGTGGCGTTCTGGTCGGGGTGGCCGTGACGGCGAAGCAAGCGTTGAAACGATATGTGCCCATATAA 561 0.615 MAHHDHETGSDPKHQTRLYNPYKDLEVPIRNLYQLPTSPEYLFDEEARRKRRSWGENLTFYTGCGYLGGAITGAGVGLVDGVKSFESGDTAKLRINRVLNSSGHSGRAWGNRVGIIGLIYAGIESGVEAARDADDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVLVGVAVTAKQALKRYVPI* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01908 186 PANTHER TIM23 30 175 IPR045238 GO:0022857
Rops4g01908 186 Pfam Tim17/Tim22/Tim23/Pmp24 family 60 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01908 Rops-Chr4 44247996 44248556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01908 2 186 Chloroplast and Mitochondria Gene Families AT1G72750 69.149 2.40e-82 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01908 K17794 - gmx:100777112 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00380 7 4914110 4914975 Rops4g01908 4 44247996 44248556 PCT