Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01901 ATGTTGTGTATATTAATAAAGAGCCTTGTTGAAGCTGAATGCCCTGGGTTAGTCTCTTGTGCTGATATCTTAGCTTTGACTGCCAGAGACTCGGTTCATGCCATTGGTGGACCATTTTGGAGTGTTCCAACAGGTCGAAGGGATGGGGTCGTTTCTAATGCAACAGAAGCCCTTCGTGGCCTTCCTGCTCCATTTCACAACCTCATCACCCTCTTAACAATCTTTGGCAACGTTGGACTTGATGTAAATGACTTGGTCGTGCTCTCTGGTGCTCACACGATTGATGTTTTAAAGCCAAATCTACCAGATCATGGGGTACCTTTAAACAAAGTCTTTGACAGGCAAGAATCGTCCGAACTCTCTTCGACAGACACAGTTGTCCAATTTGTTCATCCATCGCATGTTCCGAGCCAGGAGTTGCTTTAA 426 0.4531 MLCILIKSLVEAECPGLVSCADILALTARDSVHAIGGPFWSVPTGRRDGVVSNATEALRGLPAPFHNLITLLTIFGNVGLDVNDLVVLSGAHTIDVLKPNLPDHGVPLNKVFDRQESSELSSTDTVVQFVHPSHVPSQELL* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01901 141 PRINTS Plant peroxidase signature 36 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01901 141 PRINTS Plant peroxidase signature 17 27 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01901 141 PRINTS Plant peroxidase signature 83 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01901 141 PRINTS Haem peroxidase superfamily signature 18 35 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01901 141 PRINTS Haem peroxidase superfamily signature 84 99 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01901 141 PRINTS Haem peroxidase superfamily signature 36 48 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01901 141 ProSitePatterns Peroxidases proximal heme-ligand signature. 84 94 IPR019793 -
Rops4g01901 141 SUPERFAMILY Heme-dependent peroxidases 6 98 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops4g01901 141 Gene3D Peroxidase, domain 2 62 96 - -
Rops4g01901 141 PANTHER PEROXIDASE 25-RELATED 6 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01901 141 ProSiteProfiles Plant heme peroxidase family profile. 6 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01901 141 Gene3D - 6 61 - -
Rops4g01901 141 Pfam Peroxidase 6 96 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01901 Rops-Chr4 44101819 44106439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01901 6 96 Peroxidase AT4G11290 64.835 1.64e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01901 K00430 - gmx:100785662 148.673