Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01887 ATGGGTTTGCCCCTTCTGGGTGAGACCCTTCATTTCATATCCACTTACACTTCCTCTGATATTCAACCCTTCGTTAAGAAGCGAATGGAAAGGTATGGACCAATCTTCAAGACCAGCTTGATAGGACAATCAGTTGTAGTGTCAACAGACTTGGATCTTAATTACTTCATCTTCCAGAAAGAGGGACAATTGTTCCAGAGCTGGTACCCAGCTTCATATGCAAAGACTTTTGGGAACGAAAGTGTTTCCATACATGGTATTTTGCACAAATACCTTAAGAACATGGTGTTGAATCTATTTGGCCATGAAGGCCTTAAAAAGATGCTCCCAGAAGTTGAACATACAACATGCAGAACATTGCAACAATGGTCGTGTCAGGATAGTGTTGAATTGAAGGAAGCAATACAAACGATGATATTTGATTTGTCTGCCAAAAAACTCATTAGTTATGATTCTACCAAGTCCTCAGAGAATTTAAGGGACAACTTTGCTGCTTTTATGCGAGGAATATTCTCGTTGCCTCTGGACATTCCAGGAACAGCCTTTCACAAATCTCTAGAGGGTAGGAAAAGCGCAATGAAGATGCTAAAGAAATTGCTGCATGAAAGACGGGAACTGAATAAGAAACAGCAGACTGATTTCTTTGACTTTGTTATTGAAGAACTTGGGAAAGAAGGAACAATCCTCACCGAAGAGATCATTTTGGACCTCATATTTTCCCTCCTCTTTGCAAGCTTTGAAACCACTTCGCTGACCCTGACTTATGCTATGAAATTACTCACTGACCATCCCATGGTGCTCAAGCAATTACAAGAAGAACATGAAGCCATTCTCAAACGACGTGAAGATCCTAACTCAGGAGTCACGTGGCAAGAATACAAATCAATGAGATTTACAATTCAGTTCATAAATGAAACTCTGAGACTCGCAAATATAACTCCTGGAATCTTCCGGAAGACACAAAGGGATTTTAATTTTAAGGGATATACCATACCAGCAGGCTGGGCAATCATGGTGTGTCCCCCTGCTGTGCACTTAAACCCGGAGAATTTTCAGGACCCTCTTACATTCAACCCATGGAGATGGGAGGAAAAGGAACTTGGTCCTAGTAAAAATTTCATGGCTTTCGGTGGAGGAATGAGATTTTGTGTTGGGGCAGACTTTGCTAAGGTTGAGATGGCTGTTTTTCTTCATAAGTTGGTAACAGGTTACAGGTGGCGACTCATCAAAGGAGGGAATACTATTCGGACTCCTGTTTTACAATTTCCAAATGACTTTCACGTTCAGATAATGAAAAAAGATCAAAGCAAGCAAGAACCATAA 1323 0.4089 MGLPLLGETLHFISTYTSSDIQPFVKKRMERYGPIFKTSLIGQSVVVSTDLDLNYFIFQKEGQLFQSWYPASYAKTFGNESVSIHGILHKYLKNMVLNLFGHEGLKKMLPEVEHTTCRTLQQWSCQDSVELKEAIQTMIFDLSAKKLISYDSTKSSENLRDNFAAFMRGIFSLPLDIPGTAFHKSLEGRKSAMKMLKKLLHERRELNKKQQTDFFDFVIEELGKEGTILTEEIILDLIFSLLFASFETTSLTLTYAMKLLTDHPMVLKQLQEEHEAILKRREDPNSGVTWQEYKSMRFTIQFINETLRLANITPGIFRKTQRDFNFKGYTIPAGWAIMVCPPAVHLNPENFQDPLTFNPWRWEEKELGPSKNFMAFGGGMRFCVGADFAKVEMAVFLHKLVTGYRWRLIKGGNTIRTPVLQFPNDFHVQIMKKDQSKQEP* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01887 440 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 376 385 IPR017972 GO:0005506|GO:0016705
Rops4g01887 440 Gene3D Cytochrome P450 1 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01887 440 PRINTS P450 superfamily signature 374 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01887 440 PRINTS P450 superfamily signature 244 261 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01887 440 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01887 440 PRINTS P450 superfamily signature 301 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01887 440 PRINTS E-class P450 group I signature 29 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01887 440 PRINTS E-class P450 group I signature 340 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01887 440 PRINTS E-class P450 group I signature 373 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01887 440 PRINTS E-class P450 group I signature 253 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01887 440 PRINTS E-class P450 group I signature 383 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01887 440 PRINTS E-class P450 group I signature 233 250 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01887 440 PRINTS E-class P450 group I signature 300 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01887 440 PANTHER CYTOCHROME P450 26 1 409 - -
Rops4g01887 440 FunFam Cytochrome P450 family protein 1 432 - -
Rops4g01887 440 CDD CYP90-like 28 430 - -
Rops4g01887 440 Coils Coil 189 209 - -
Rops4g01887 440 SUPERFAMILY Cytochrome P450 2 430 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01887 440 Pfam Cytochrome P450 3 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01887 Rops-Chr4 43765122 43768029 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01887 1 433 Cytochrome P450 AT1G12740 65.306 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01887 - - gmx:100794607 682.559