Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01878 ATGGTTGAAGATTTAATGAAATTGGACAATTTAGAAGCAATGAGACAGCAGGGTATTGTTCCATCCTCGGTTATCTCGAGCCACAACATGCATCTTGGGGTCCTTGCAACTGCTTGGCATGCCATCTTGACTCCAAATGGAGATGCCTCAAGGTTGTATCTCCAGCATTTTGTGGGGCATCTTGACTCCAAATGGGAAAGTGATATCCCGTCCTCTCGTTTTGTCTGGCTTCGGTTCCAAGGGGTTCCAATCCATGCTTGCGGGGAAGACTTCTTTAGATTGATGGTTGCCGAGTTTGGAACGTTCATTACTCTTGATCCGCAAATTGCTAGAAAGGAAAGCTTTAACATAAGGTTTGTTGAAGAGCCTCATGAGTATCCCACGGTGGGTGGTTTGTTTAGTTCCAGCTGGGATCCAAACGGATCACCTTCATCAGAAGGGTCTTCAGAAGGTTCGCTTGAAGGTGAGTTTGATTCATTAAAGGAGTATTCAGATGCCAGAGTTTTGGAGTATCCCTCTTCCGGTTCGGAGTCACAGAAGGAGAAGGAGTTGCTGTTTCACTCCCACGTGGCTAGCTCTCAAAAGTCGAAAGGGTGTCCTGCCTTGGCTGGAGACTTGTCGGGGTATCACTCTGACTCACAATTAATTTGTAAAAGAATGTTTGTTAGGCCACCAAGTTTGCGGGTCTTTGATGCTACGGTTTTAAACGCGCAACTTGGGAATCATGGGAGTGGTGGTAAGCATGTGATTGGCCTTGTGGGTTTGCAAGGTCCACTAAAGAGGCTTTATTCTAGTGCAAGGGCTGGTGGCCAACTTGCTCCTAACGTCCTGTTGGAGAAGCATCCTTCTCCCTCGGGTTTGGCGAGAATTTGCTTGGTGGACGTGGGGTCCCAAGCTCACGTGGTTAACAATCTGGACAAGGGAGATTCTTTGTTGGGTGCTTCTTATTCTACGGATGTTTGTCCTCTTTTGGAGGGCCATGGGGTTGGTAAGGAGCACGTGGATGTAGCTGACTCTCTCCATCATTTAGTGCTTCACGATGGGCAGCTTGTTTCTTCGGATGTGGCTCTAACTGGGTCCCAGCAAGTGCGTTTTGGAGGATGTCCAGCTGGTCCATTAGACGGTTTGTTGTTTGCAGGGGAATCAAGTGAAGCTAAAAATGCTAGGTGGGCCTTGGCTGTTTTAAATGGTTGTCCAAATGATTTAAGGGGCCAACTTCATTCTTTGGGCCCATTAGCCATGAGTCCTTTCGAGAGGGGGAATCAATCTAGTGATTCTATAGGATGCGTGGAGTCAAGGCTGGTGGAGCCGTCTTTGAGTGTAGAACGTGAGTCGGCTTCGGAAGAGTTTGTAGGATTAACATCTGATGAGGTCAAGCGGTCAAGTTATCAAGCCAATGCAAATTTGGGTAAGATTCCTAAGTCTGATCCTCGAATTCAAGGGAGGAGCCGGTCAGCTTATGGTGATCATTTGAAGATCCATGAGGTGGGTGTGGAACTTGTAATGAGGAGAAATGCAGAACTGTGGTATCATGTTCCTCATTCATGGCTAAAGCCAACTGGAAATTTATTGGTTGTTAGGAATTGGGTGGGGGTCTCAATAGAAGATAAATAG 1614 0.469 MVEDLMKLDNLEAMRQQGIVPSSVISSHNMHLGVLATAWHAILTPNGDASRLYLQHFVGHLDSKWESDIPSSRFVWLRFQGVPIHACGEDFFRLMVAEFGTFITLDPQIARKESFNIRFVEEPHEYPTVGGLFSSSWDPNGSPSSEGSSEGSLEGEFDSLKEYSDARVLEYPSSGSESQKEKELLFHSHVASSQKSKGCPALAGDLSGYHSDSQLICKRMFVRPPSLRVFDATVLNAQLGNHGSGGKHVIGLVGLQGPLKRLYSSARAGGQLAPNVLLEKHPSPSGLARICLVDVGSQAHVVNNLDKGDSLLGASYSTDVCPLLEGHGVGKEHVDVADSLHHLVLHDGQLVSSDVALTGSQQVRFGGCPAGPLDGLLFAGESSEAKNARWALAVLNGCPNDLRGQLHSLGPLAMSPFERGNQSSDSIGCVESRLVEPSLSVERESASEEFVGLTSDEVKRSSYQANANLGKIPKSDPRIQGRSRSAYGDHLKIHEVGVELVMRRNAELWYHVPHSWLKPTGNLLVVRNWVGVSIEDK* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01878 537 MobiDBLite consensus disorder prediction 134 152 - -
Rops4g01878 537 MobiDBLite consensus disorder prediction 134 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01878 Rops-Chr4 43451235 43468383 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01878 13 44 B3 DNA Binding Superfamily AT5G62000 90.625 1.78e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01878 - - mdm:103437483 63.1586