Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01868 ATGAACATGACCGTGGCCGAGGAAGAACCAAATGAAGAGGTTCATGTCCCGGCTGAAATTGATTGGCAAATGCTTGATAAATCAAAGTTTTTCTTCGTTGGTGCTGCACTTTTCTCTGGGGTATCTGCAACACTTTACCCTGTTGTTGTGTTGAAAACTAGGCAACAAGTGGCTCAATCCCAAGTTTCTTGCATCAAGACTGCATTTTCATTGATTAGGGGTGAAGGGTTTCGAGCATTGTACCGTGGGTTTGGGACTTCTTTGATGGGTACAATACCTGCTAGAGCTTTATATATGTCTGCACTCGAGATTACCAAGAGCAATGTGGGCACTGCTACTGTTAGGTTTGGTCTTGCTGAACCAACTGGTGCTGCAATTGCCAATGCAGCTGCTGGTTTGAGTGCAGCCATGGCAGCTCAACTTGTGTGGACCCCAGTTGATGTTGTGAGCCAGAGGTTGATGGTTCAAGGTGGTTGTAATTCCACTAATCCTAAGGCTCATGCTTTTAGATATATCAATGGGATTGATGCCTTCAGGAAAATTCTAAGCACAGATGGTCCTAGGGGCTTGTATAGAGGATTTGGGATATCAATTTTGACCTATGCACCTTCAAATGCTGTTTGGTGGGCTTCATATTCTGTTGCACAAAGGATGGTTTGGGGTGGAGTTGGGTACTACTTGTGCAAGAAAGGTGAGGAGAGTGGTCACACTTCAGCTACTAATGCATTGAGGCCAGATACAAAAGCTGTGATGGCAGTTCAAGGAGTAAGTGCAGCAATGGCAGGTGGCATGTCTGCTTTAATCACCATGCCATTGGATACAATCAAGACAAGACTTCAGGTCTTGGATGGTGATGAGAATGGCCGCCGTGGACCGACGGTTATGCAGACAGTGAGGAGTCTAGTTAAGGAAGGTGGTTGGATGGCTTGTTATAGAGGATTGGGACCTAGATGGGCTTCAATGTCAATGTCTGCAACAACAATGATCACAACTTATGAGTTCTTAAAACGGCTTTCGGCGAAGAATCAAGAGGTTTTGACATGA 1044 0.4521 MNMTVAEEEPNEEVHVPAEIDWQMLDKSKFFFVGAALFSGVSATLYPVVVLKTRQQVAQSQVSCIKTAFSLIRGEGFRALYRGFGTSLMGTIPARALYMSALEITKSNVGTATVRFGLAEPTGAAIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQGGCNSTNPKAHAFRYINGIDAFRKILSTDGPRGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGYYLCKKGEESGHTSATNALRPDTKAVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTVRSLVKEGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSAKNQEVLT* 348
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01868 347 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Rops4g01868 347 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 12 344 - -
Rops4g01868 347 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 338 IPR018108 -
Rops4g01868 347 SUPERFAMILY Mitochondrial carrier 23 335 IPR023395 -
Rops4g01868 347 Gene3D Mitochondrial carrier domain 29 345 IPR023395 -
Rops4g01868 347 Pfam Mitochondrial carrier protein 126 219 IPR018108 -
Rops4g01868 347 Pfam Mitochondrial carrier protein 38 108 IPR018108 -
Rops4g01868 347 Pfam Mitochondrial carrier protein 253 342 IPR018108 -
Rops4g01868 347 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Rops4g01868 347 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Rops4g01868 347 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 218 IPR018108 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops4g01868 Rops-Chr4 43370243 43371954 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01868 1 344 Chloroplast and Mitochondria Gene Families AT1G72820 74.640 0.0 525
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01868 K15121 - gmx:100784616 565.459
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01868 4 43370243 43371954 Rops4g01868 4 43370243 43371954 ECH