Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops4g01868 | ATGAACATGACCGTGGCCGAGGAAGAACCAAATGAAGAGGTTCATGTCCCGGCTGAAATTGATTGGCAAATGCTTGATAAATCAAAGTTTTTCTTCGTTGGTGCTGCACTTTTCTCTGGGGTATCTGCAACACTTTACCCTGTTGTTGTGTTGAAAACTAGGCAACAAGTGGCTCAATCCCAAGTTTCTTGCATCAAGACTGCATTTTCATTGATTAGGGGTGAAGGGTTTCGAGCATTGTACCGTGGGTTTGGGACTTCTTTGATGGGTACAATACCTGCTAGAGCTTTATATATGTCTGCACTCGAGATTACCAAGAGCAATGTGGGCACTGCTACTGTTAGGTTTGGTCTTGCTGAACCAACTGGTGCTGCAATTGCCAATGCAGCTGCTGGTTTGAGTGCAGCCATGGCAGCTCAACTTGTGTGGACCCCAGTTGATGTTGTGAGCCAGAGGTTGATGGTTCAAGGTGGTTGTAATTCCACTAATCCTAAGGCTCATGCTTTTAGATATATCAATGGGATTGATGCCTTCAGGAAAATTCTAAGCACAGATGGTCCTAGGGGCTTGTATAGAGGATTTGGGATATCAATTTTGACCTATGCACCTTCAAATGCTGTTTGGTGGGCTTCATATTCTGTTGCACAAAGGATGGTTTGGGGTGGAGTTGGGTACTACTTGTGCAAGAAAGGTGAGGAGAGTGGTCACACTTCAGCTACTAATGCATTGAGGCCAGATACAAAAGCTGTGATGGCAGTTCAAGGAGTAAGTGCAGCAATGGCAGGTGGCATGTCTGCTTTAATCACCATGCCATTGGATACAATCAAGACAAGACTTCAGGTCTTGGATGGTGATGAGAATGGCCGCCGTGGACCGACGGTTATGCAGACAGTGAGGAGTCTAGTTAAGGAAGGTGGTTGGATGGCTTGTTATAGAGGATTGGGACCTAGATGGGCTTCAATGTCAATGTCTGCAACAACAATGATCACAACTTATGAGTTCTTAAAACGGCTTTCGGCGAAGAATCAAGAGGTTTTGACATGA | 1044 | 0.4521 | MNMTVAEEEPNEEVHVPAEIDWQMLDKSKFFFVGAALFSGVSATLYPVVVLKTRQQVAQSQVSCIKTAFSLIRGEGFRALYRGFGTSLMGTIPARALYMSALEITKSNVGTATVRFGLAEPTGAAIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQGGCNSTNPKAHAFRYINGIDAFRKILSTDGPRGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGYYLCKKGEESGHTSATNALRPDTKAVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTVRSLVKEGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSAKNQEVLT* | 348 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops4g01868 | 347 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 26 | 108 | IPR018108 | - | |
Rops4g01868 | 347 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 12 | 344 | - | - | |
Rops4g01868 | 347 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 249 | 338 | IPR018108 | - | |
Rops4g01868 | 347 | SUPERFAMILY | Mitochondrial carrier | 23 | 335 | IPR023395 | - | |
Rops4g01868 | 347 | Gene3D | Mitochondrial carrier domain | 29 | 345 | IPR023395 | - | |
Rops4g01868 | 347 | Pfam | Mitochondrial carrier protein | 126 | 219 | IPR018108 | - | |
Rops4g01868 | 347 | Pfam | Mitochondrial carrier protein | 38 | 108 | IPR018108 | - | |
Rops4g01868 | 347 | Pfam | Mitochondrial carrier protein | 253 | 342 | IPR018108 | - | |
Rops4g01868 | 347 | PRINTS | Mitochondrial carrier protein signature | 81 | 99 | IPR002067 | GO:0055085 | |
Rops4g01868 | 347 | PRINTS | Mitochondrial carrier protein signature | 132 | 154 | IPR002067 | GO:0055085 | |
Rops4g01868 | 347 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 123 | 218 | IPR018108 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops4g01868 | Rops-Chr4 | 43370243 | 43371954 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops4g01868 | 1 | 344 | Chloroplast and Mitochondria Gene Families | AT1G72820 | 74.640 | 0.0 | 525 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops4g01868 | K15121 | - | gmx:100784616 | 565.459 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops4g01868 | 4 | 43370243 | 43371954 | Rops4g01868 | 4 | 43370243 | 43371954 | ECH |