Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01861 ATGTTGACTTGCATAGCGTGTTCTAAGCATCTCAATAATGGATCTCTTCACCAAGAAGAAGAGGAAGAAGCTGTGCAAACTCCCAGCACCAAGCAAGCCATCAAGGCTCTCACTGCTCAGATCAAGGACATGGCAGTGAAGGCTTCTGGGGCCTATAAGAATTGCAAGCCTTGTTCAGGATCTTCCAATAACAAGAATAGAAAGTATGCTAACTCTGATCTAGGCTCAGATTCAGCAAGGTTCCATTGGGCCTACCGCAGACCAGGTAGCTCCAATTCAACTCCAAGGATGTGGGGAAAGGAAATGGAAGCTAGACTGAAAGGGCTTTCAAGTGGTGAAGGAACACCAGCATCAGTGAGTGGACGTACTGAATCAGTGGTGTTCACGGAGGAGGATGAGCCTAAGGAATGGGTTGCACAAGTGGAGCCTGGTGTGCTTATTACTTTTGTATCATTGCCGCAAGGAGGGAATGATTTGAAGAGGATACGGTTCAGTCGTGAAATGTTTAATAAATGGCAAGCACAGAGGTGGTGGGCAGAGAATTATGACAAAGTCATGGAGTTGTACAATGTTCAAAGGTTCAATCAACAAGCTGTTCCTCTTCCAACCCCACCTAGATCTGAAGATGAGAGTTCAAAGATTGAATCTGCCAGGGACAGCCCTGTCACTCCTCCTCTCAGCAAAGAGCGCCTGCCCCGTCATCTTCACCACCCAATGGCAATGGGCTACTCCTCATCAGATTCACTGGATCACCACCAAATGCAACCTCACCCTTGCTATGAAACAAGTGGTCTAGCATCAACACCAACTCTTTCCAACATTAGTGAGCCAAAAACTGGAAGATCATCCATGGATGGTACTGTAAGGACAAGTTCATCAGGAGACGGTGATCACTCAGGTGAGCTCTCAATCAGCAATGCCAGTGATATGGAAACTGAATGGGTTGAACAGGATGAACCAGGAGTATACATCACTATCAGAGCACTGCCAGGTGGAACCAGAGAACTTAGGCGTGTCCGGTTCAGCCGTGAAAAGTTTGGAGAAATGCACGCCAGATTATGGTGGGAAGAGAACCGTGCTAGGATACAAGAACAATACTTGTAA 1104 0.4683 MLTCIACSKHLNNGSLHQEEEEEAVQTPSTKQAIKALTAQIKDMAVKASGAYKNCKPCSGSSNNKNRKYANSDLGSDSARFHWAYRRPGSSNSTPRMWGKEMEARLKGLSSGEGTPASVSGRTESVVFTEEDEPKEWVAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKIESARDSPVTPPLSKERLPRHLHHPMAMGYSSSDSLDHHQMQPHPCYETSGLASTPTLSNISEPKTGRSSMDGTVRTSSSGDGDHSGELSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSREKFGEMHARLWWEENRARIQEQYL* 368
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01861 367 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 367 IPR044532 -
Rops4g01861 367 MobiDBLite consensus disorder prediction 260 302 - -
Rops4g01861 367 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Rops4g01861 367 ProSiteProfiles BRX domain profile. 312 367 IPR013591 -
Rops4g01861 367 Pfam Transcription factor regulating root and shoot growth via Pin3 311 366 IPR013591 -
Rops4g01861 367 Pfam Transcription factor regulating root and shoot growth via Pin3 135 189 IPR013591 -
Rops4g01861 367 MobiDBLite consensus disorder prediction 198 302 - -
Rops4g01861 367 ProSiteProfiles BRX domain profile. 135 190 IPR013591 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops4g01861 Rops-Chr4 43274748 43279390 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01861 1 367 Major Intrinsic Protein MIP AT1G31880 47.668 5.53e-103 306
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01861 - - gmx:100805480 682.945
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01861 4 43274748 43279390 Rops4g01861 4 43274748 43279390 ECH