Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01819 ATGGCAATAGAATTGGCAGCTCCTCCTAGTTGGGTTACAACTGCAGCCACATGTGTTGCAACCTTGGCCATCCTCCTCCTCTTCAGCCGCCATCTCCGCCGCCGGAGATTCAATATGCCACCAGGCCCAAAACCATGGCCCATCATAGGAAACCTCAACCTTATTGGATCCCTCCCACATAGATCCATCCATTCTCTTAACCAAAAGTATGGACCCATCATGCATATTTGGTTTGGCTCCCACCCTATTGTTGTGGGCTCCTCCGTTGATATGGCAAAAGCCTTCCTCAAAACCCACGACGCCACCCTTGCCGACCGGCCCAAATTCGCCGCCGGCAAGTACACCACCTACAACTATTCCGACATAACTTGGTCCCAATATGGCCCATATTGGCGACAAGCCCGTAGAATGTGCCTAATGGAACTTTTCAGTCCAAAACGCCTTGAATCTTATGAGTATATTAGAAAACAAGAGTTGCATGCTTTTCTTAATGAACTCTTCAACTCTTCAAACAAAACCATTTTATTGAAAGACCATCTTTCTACTTTGAGTCTCAATGTTATTAGCCGCATGGTCTTGGGGAAGAAGTACCTAGAGAAGTCAGAGAATGCTATAATTTCACCTGAGGAGTTCAAGAAGATGCTTGATGAGTTGTTTTTGCTTAATGGGGTTCTCAACATAGGGGACTATATCCATTGGATTAACTTCTTGGACTTGCAGGGTTACATAAAGAGGATGAAGGCTTTGAGTAAGAAGTTTGATAGGTTTATGGAGCATGTGTTGGAGGAACATATTGAGAGAAAGAAAGGGGTGAAGGATTATGTTGCCAAAGACATGGTTGATGTGCTTTTGCAACTTGCTGAGGATCCTACTCTTGAGGTCAAGCTTGAGAGGCATGGAGTCAAAGCGTTTACTCAGGACCTAATAGCAGGTGGGACAGAGAGCTCAGCAGTAACTGTAGAATGGGCAATCTCTGAGCTATTGAAAAGGCCAGGGATCTTCAAGAAGGCAACAGAGGAGCTAGACAGGGTGATAGGGAGAGATAGATGGGTTGAAGAGAATGACATTGTGAATTTACCTTATGTCAATGCCATTGCTAAGGAAGCAATGAGGCTACACCCTGTGGCACCACTGTTAGTGCCAAGATTAGCTAGGGAGGACTTCCATATTGCTGGGTATGATATCCCCAAAGGGACACAAGTGCTTGTTAATGTTTGGACTATTGGTAGAGATCCAGCACTTTGGGACAACCCAGATGAATTCATGCCAGAGAGGTTTCTTGTCAAGGATATTGATGTGAAAGGGCATGACTATGAGTTGTTGCCATTTGGTGCTGGTAGAAGGATGTGCCCTGGGTACTCTCTTGGCCTTAAGGTGATTCAATCAAGTTTGTCCAACCTTTTGCATGGCTTTAATTGGAGACTCCCTGATAATGTAAAGAAGGAGGACTTGAATATGGAGGAGATTTTTGGGCTTTCAACACCTAAGAAAATACCTCTTGAAGTTGTTGTTGAACCTAGACTTCCAAATCATCTTTATTCCCTTTGA 1548 0.4451 MAIELAAPPSWVTTAATCVATLAILLLFSRHLRRRRFNMPPGPKPWPIIGNLNLIGSLPHRSIHSLNQKYGPIMHIWFGSHPIVVGSSVDMAKAFLKTHDATLADRPKFAAGKYTTYNYSDITWSQYGPYWRQARRMCLMELFSPKRLESYEYIRKQELHAFLNELFNSSNKTILLKDHLSTLSLNVISRMVLGKKYLEKSENAIISPEEFKKMLDELFLLNGVLNIGDYIHWINFLDLQGYIKRMKALSKKFDRFMEHVLEEHIERKKGVKDYVAKDMVDVLLQLAEDPTLEVKLERHGVKAFTQDLIAGGTESSAVTVEWAISELLKRPGIFKKATEELDRVIGRDRWVEENDIVNLPYVNAIAKEAMRLHPVAPLLVPRLAREDFHIAGYDIPKGTQVLVNVWTIGRDPALWDNPDEFMPERFLVKDIDVKGHDYELLPFGAGRRMCPGYSLGLKVIQSSLSNLLHGFNWRLPDNVKKEDLNMEEIFGLSTPKKIPLEVVVEPRLPNHLYSL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01819 515 CDD CYP71_clan 71 500 - -
Rops4g01819 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Rops4g01819 515 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01819 515 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01819 515 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01819 515 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01819 515 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01819 515 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01819 515 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01819 515 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01819 515 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01819 515 SUPERFAMILY Cytochrome P450 40 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01819 515 PANTHER CYTOCHROME P450 98A9 14 514 - -
Rops4g01819 515 Gene3D Cytochrome P450 32 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01819 515 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01819 515 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01819 515 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01819 515 FunFam Cytochrome P450 84A1 31 508 - -
Rops4g01819 515 Pfam Cytochrome P450 40 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01819 Rops-Chr4 42662052 42664583 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01819 24 515 Cytochrome P450 AT5G07990 42.178 5.13e-139 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01819 K20623 - gmx:100790480 912.909