Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01814 ATGAAGACCCTAAATGGGTTATTCGGTGCAAGACGAAGAAAATTTCATGGGGTTTTCAATGGCTTGTGTGCATTGGTTGTGTTTTTCTTCTTTTACAATAGGGAAGACATCATTCATAATCCACTTCTTAGGCAATCTGCATATTTGGTGAATCATCGTGTGCCTCAAAATGCAATTTTGGAAGATGGGGTTTCTGTGATTCACCGTAGAATGGTTGAGATTAGCCCTAACACTTCAAGTGTAGCTGGTCACCCTCATGACAAAGAATATTTAGGTGGAAGTAGGCCTGGATTGTGTGTTGAATTGCTGCACCATGATGGTTATGCTAGCCCTTGTGAATTCTTAAAGGCCAATCCTCAGTGCTCTTCTGAGGGGTACCTTGATTACTTGAGGTTTTTCTATTGTAAATGTCAAAATTTTAGAGTGCTTGGATATTTAGTATTGGGTGTATGGCTTGCTGCTTTGTTTTATCTCTTGGGGAACACTGCAGCTGATTACTTTTGTCCTTCTCTTGAGCATCTTTCAATGCTCTTGAAATTGTCTCCAACTGTGGCTGGTGTTGTGCTGCTTCCACTTGGGAATGGGGCACCTGATGTGTTTGCCAGTATAGCTGCCTTTGTGGGTACTGAAACGGGCGAAGTCGGTCTTAACAGCGTGTTAGGCGGTGCTCTTTTTGTTACCACTGTTGTTGCTGGAATCGTTTCTCTCTGTGTTGCAGAGAGGGAGGTTCAAATTGATCGAAGATGTTTTATAAGGGATTTGAGTTTCTTTCTACTCACTCTTGTTTCGCTGCTTTTGATTTTGGTTGTTGGTAAGGTGGGTGTTATTGCAGCCATTGCTTTTGTATCGATTTATGTTGTTTATGCATTCATTGTTGCTGCCAATGAGATATTGCGGAAACATGCACAGAGGTTGAAATTGGATTCTGTCACACCATTGCTTCCTGTCCAGGGAAGTCTGTTCTCTCTGGGCTCTGAAGAGGATGCGCCTATCTATCGCTCTCTGCTGGACTTGGACGAAAGTGATCCTCCCCATCTCCCTCCTTCCTTGCCACAGTGGATGTGGTCTTCCAATGTGGCAATATATTCAAACCAGTCAAGTAAAATCAATCTCTTAGATGATGAAAGGCCTCCTTGGGGATGGAGTGACGAGTCTACACAAAACACCAGGTTGTCATTCTCTTTTTCAAAACTTTTTTTACTGATGGAGATGCCATTGGCAATTCCTAGACGGCTAACAATTCCAATGGTTAATGAGGAAATATGGTCGAAGCCGTTTGCTGTGACCAGTGCTTCATTGGCTCCCATTCTGATGGCCTTTTTATGGAGCACTCAAGATGACGTGGGTAATAAGAGTATTATACTTGCTTACTGTTTTGGTGTTGCTATTGGATGCACACTTGGTATTCTTGCATATAAATACACACTGTCTGATCATCCACCGACTCAATGTTTGATTCCCTGGGTTCTTGGTGGATTCATCATGAGCATAGTGTGGTTCTACATCATAGCAAATGAGCTTGTGGCTCTATTATTAGCATTTGGTGTAATTTTCGGAATTAATCCATCCATCCTGGGATTAACTGTATTAGCATGGGGAAATTCAATGGGAGATTTGATGTCAAATGTTGCATTGGCATTGGAAGGTGAAGATGGAGTTCAGATTGCTTTATCTGGATGCTATGCAGGTCCTATGTTCAACACACTTGCTGGTTTGGGGATCTCTCTGCTGCTTGGGGCCTGGTCAAAGAAACCTTCTTTGTACGTAGTGCCTGAAGATAATAGCTTATTTTACACCATGGGGTTTCTGATCACAGGACTTCTGTGGGCACTTGTTGTTTTACCACGCAACAACATGCATCCTGATAGAATATTAGGAATGGGTCTTATCGCCCTTTATGTGATTTTTCTTTCTTTCAGAGTGTGCACTGCTATGGAGCTAATAACAGTTGCTGGTTTAAGTTGA 1965 0.4234 MKTLNGLFGARRRKFHGVFNGLCALVVFFFFYNREDIIHNPLLRQSAYLVNHRVPQNAILEDGVSVIHRRMVEISPNTSSVAGHPHDKEYLGGSRPGLCVELLHHDGYASPCEFLKANPQCSSEGYLDYLRFFYCKCQNFRVLGYLVLGVWLAALFYLLGNTAADYFCPSLEHLSMLLKLSPTVAGVVLLPLGNGAPDVFASIAAFVGTETGEVGLNSVLGGALFVTTVVAGIVSLCVAEREVQIDRRCFIRDLSFFLLTLVSLLLILVVGKVGVIAAIAFVSIYVVYAFIVAANEILRKHAQRLKLDSVTPLLPVQGSLFSLGSEEDAPIYRSLLDLDESDPPHLPPSLPQWMWSSNVAIYSNQSSKINLLDDERPPWGWSDESTQNTRLSFSFSKLFLLMEMPLAIPRRLTIPMVNEEIWSKPFAVTSASLAPILMAFLWSTQDDVGNKSIILAYCFGVAIGCTLGILAYKYTLSDHPPTQCLIPWVLGGFIMSIVWFYIIANELVALLLAFGVIFGINPSILGLTVLAWGNSMGDLMSNVALALEGEDGVQIALSGCYAGPMFNTLAGLGISLLLGAWSKKPSLYVVPEDNSLFYTMGFLITGLLWALVVLPRNNMHPDRILGMGLIALYVIFLSFRVCTAMELITVAGLS* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01814 654 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 52 648 - -
Rops4g01814 654 Pfam Sodium/calcium exchanger protein 489 640 IPR004837 GO:0016020|GO:0055085
Rops4g01814 654 Pfam Sodium/calcium exchanger protein 150 292 IPR004837 GO:0016020|GO:0055085
Rops4g01814 654 Gene3D - 180 311 IPR044880 -
Rops4g01814 654 Gene3D - 427 642 IPR044880 -
Rops4g01814 654 FunFam Cation/calcium exchanger 5 426 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01814 Rops-Chr4 42523542 42526241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01814 88 641 Antiporters AT5G17860 41.261 1.11e-133 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01814 K13754 - gmx:100796101 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01814 4 42523542 42526241 Rops4g01814 4 42523542 42526241 ECH