Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01813 ATGTCTGCAACAATTATCAGTGACCCTATGGTTGTTATATCAGCACCAGAAACTCAATCCGCAACTAGCATATTAGTTGCACAAAACGAAGTTGAATTTGCCATTTGTGACTGTTGTGGACTATCAGAAGAGTGCACACCAGCCTATATAGAACGAATCAGAGAGAGGTACCATGGAAAATGGGTTTGTGGTTTATGTGCTGAAGCTGTTAAGGATGAAATTGTAAGGTCTGAGAGGCTTGTTAGCACAGAAGAAGCAATGACAAAGCATATGAACTTTTGCAAAAAGTTCAACACTTCAGGTCCTCCTCCAAACCCAACAGTACATTTGATATCAGCTATGAGACAGATTCTTAGGAGGAGTTTGGATTCTCCTAGAGTAAGGTCCACACCAAGTAGTCCAACTAAGACTAATAGAGAGATTCGTGGTTCTGGACTTGCCAGGTCTGAGAGCTGTATCCCTTCTCTATCTGGTTCCTGA 480 0.4188 MSATIISDPMVVISAPETQSATSILVAQNEVEFAICDCCGLSEECTPAYIERIRERYHGKWVCGLCAEAVKDEIVRSERLVSTEEAMTKHMNFCKKFNTSGPPPNPTVHLISAMRQILRRSLDSPRVRSTPSSPTKTNREIRGSGLARSESCIPSLSGS* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01813 159 MobiDBLite consensus disorder prediction 123 159 - -
Rops4g01813 159 Pfam Protein of unknown function (DUF1677) 31 120 IPR012876 -
Rops4g01813 159 PANTHER OS01G0745000 PROTEIN 22 157 IPR012876 -
Rops4g01813 159 MobiDBLite consensus disorder prediction 122 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01813 Rops-Chr4 42512977 42514395 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01813 - - lja:Lj3g3v2576730.1 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01292 10 25494291 25494988 Rops4g01813 4 42512977 42514395 ECH
Rops4g01813 4 42512977 42514395 Rops4g01813 4 42512977 42514395 ECH
Rops4g01813 4 42512977 42514395 Rops10g01293 10 25514454 25515197 ECH