Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01805 ATGGAATCGCAGGAGAGCCTGCCCTTGGAGGCGGCGGAGAAGATCATCCTCCGGTGGGACTCCACCGCGTCGGAGGAAGCACGTGAGAAGATGATATTCAACGGTGACCGTGAAGAAGTGGATCTCTACCTGCAAGCCGTTGATGAAATCCAACGGTCCATGTCCTCTGCTTCACTCTCTGATGAACAGAACAAGGCAAGTTCTGCCATTCAGATCGCTATGGCTCGTTTAGAAGATGAGTTCCGTAACATCCTTATCTCACACACCAACCCCATCGATCCTTTCCACCAAGAAGAAGAAGATCAACAAGAGCAACACCACCAACCTGTTTCTTCTTCTTCTACACCAAGAAAACATGATGATGATGGCGATGTTGATGTTGATGGAAAGCTTCTCCGCTTTGATTCTGGAAGCTCTGTTGCTTCTTCTAGTGTTAATAGTAGCTACCGTTCCACTAGTAGCATCCGTGAGATCGATCTGATACCTTCTGATGCAGTTTCCGACCTTAGATGCATCGCAGAGAGGATGATCTCTTCAGGGTACTTGCGTGAGTGCATACAGGTTTATGGAAGTGTGAGAAAATCTGCAGTTGATGCAAGTTTTAGGAGGCTTGGAGTTGAGAAATTGAGCATAGGTGATGTTCAGAGGTTGGAGTGGGAACAACTTGAGACCAAGATCAGGCGTTGGATAAGGGCTGCTAAGGTTTGTGTAAGGACCTTGTTTGCAAGTGAGAAGAGGCTCTGTGAGCAAATCTTTGATGGGGTTGGAACTTCCATTGATGATGCTTGTTTCATGGAAACTGTTAAGGGACCTGCTATTCAGCTTTTCAATTTTGCTGAGGCAATTAGTATAAGTAGGAGGTCACCTGAGAAGTTGTTCAAGATTCTTGACTTGCATGATGCCTTGATGGATTTGATACCTGATATTGATATCGTGTTTGATTCAAAATCTTCTGAGTCAATTCGTGTTCAGGCTGCTGAGATTCTTTCACGTTTGGCTGAGGCTGCAAGAGGGATTTTGTCAGAGTTTGAGAATGCCGTGCTTAGGGAACCATCTAAGGTTCCTGTCCCTGGTGGTACAATTCACCCTTTGACAAGGTATGTGATGAACTATATAAGTTTGATCTCTGATTACAAACAGACTTTGAATGAGCTTATAGTGTCTAAGCCATCAACGGGGTCTAGATATTCGGGTGATCCTTCAACCCCAGATATGGATTTTGCTGAGCTTGAAGGGAAGACCCCTTTGGCTATTCACTTGATTTGGATTATTGTTATATTGCAATTTAACTTGGATGGTAAGTCCAAGCATTATAAGGATGCGGCTTTGTCTCACCTTTTCATGATGAACAATGTTCACTACATTGTTCAGAAGGTGAGAGGGTCTCCTGAATTGAGGGAGATGATTGGAGATGATTATTTGAGGAAGTTGACAGGGAAATTCAGGCAGGCTGCTACTAGCTACCAGAGAGCAACTTGGGTGAGGGTGTTGTATTGTTTGAGGGATGAGGGATTGCATGTGAGTGGTGGCTTTTCTTCAGGGGTCTCAAAAAGTGCTCTCAGAGAAAGGTTTAAGGCCTTCAATGCTATGTTCGAGGAGGTTCATAGGACTCAAGCTGTATGGTTGATACCGGATTCACAACTCAGGGAGGAGCTTCGGATATCTATATCAGAGAAGCTGATACCTGCATATAGATCATTCCTAGGGAGGTTCAGGGGCCACATAGAGAGTGGAAGACATCCAGAGAACTACCTTAAGTATTCTGTTGAGGACCTGGAGGATGCTGTTTTGGATTTTTTCGAAGGAATTCCTGTTTCACAGCACTTGAGGAGGAGATCTAATTGA 1845 0.4461 MESQESLPLEAAEKIILRWDSTASEEAREKMIFNGDREEVDLYLQAVDEIQRSMSSASLSDEQNKASSAIQIAMARLEDEFRNILISHTNPIDPFHQEEEDQQEQHHQPVSSSSTPRKHDDDGDVDVDGKLLRFDSGSSVASSSVNSSYRSTSSIREIDLIPSDAVSDLRCIAERMISSGYLRECIQVYGSVRKSAVDASFRRLGVEKLSIGDVQRLEWEQLETKIRRWIRAAKVCVRTLFASEKRLCEQIFDGVGTSIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDIDIVFDSKSSESIRVQAAEILSRLAEAARGILSEFENAVLREPSKVPVPGGTIHPLTRYVMNYISLISDYKQTLNELIVSKPSTGSRYSGDPSTPDMDFAELEGKTPLAIHLIWIIVILQFNLDGKSKHYKDAALSHLFMMNNVHYIVQKVRGSPELREMIGDDYLRKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKAFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRGHIESGRHPENYLKYSVEDLEDAVLDFFEGIPVSQHLRRRSN* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01805 614 PANTHER EXOCYST COMPLEX PROTEIN EXO70 7 602 IPR004140 GO:0000145|GO:0006887
Rops4g01805 614 MobiDBLite consensus disorder prediction 97 128 - -
Rops4g01805 614 MobiDBLite consensus disorder prediction 113 128 - -
Rops4g01805 614 Pfam Exo70 exocyst complex subunit 228 596 IPR046364 GO:0000145|GO:0005546|GO:0006887
Rops4g01805 614 Gene3D Exocyst complex component Exo70 15 610 - -
Rops4g01805 614 SUPERFAMILY Cullin repeat-like 26 601 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01805 Rops-Chr4 42365918 42368679 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01805 9 613 EXO70 exocyst subunit family AT1G72470 70.927 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01805 K07195 - gmx:100808671 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01805 4 42365918 42368679 Rops4g01805 4 42365918 42368679 ECH