Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01794 ATGGCTGATTCTTCCTTCGAGATTGGCAACTACTACTCCTCAAGCCACCACAGAAGACACTATCCAACACCAGTGAGTCATGGCAGTGTGTCTGGTTCTGGCTCTTTCATACCATCCAGCTCTCGAAGCAATGCAACTTCTAGAACCAAAGGAGCTCGCCAAAGAAGAGTTCCTTCCACACCCTTTGCTTCAGATGATGACCATTCATGGCAAGGAGAGGTTTCATGGAAGTTTGAGGCCACTGGTTGGCGTGAATATTCCACAAACTTTGGTTCAGTTCTTAGTCCATGGCCAGCTAGCTCCCCTTCTGATCATAGTCGTGTGTTTCGTCAATCAGCAAATGACTATTACCTTTCTAGAACAAGTAGGTTCAGAGGCATCACAAACTCATCTTATGAACATTCTTCCTATGGAAGAGTTGAACTACGTAGCCATGTTGCTAGGGACAATGATCATAGTTACTTTGATCAGCATAGTGGGTTCTCAAAGTTGGGGATCATCAAAGAGGGTGGTAATAGGAAAGGGAGGAGTAGTCCTTTGGCTGAGGAAGATGAACTTAGTATGATAGATTATAGCATAACAGATGAACATGTTATCACACCCAGTAGGAATGGTCATGATCTTGAATTATCATATGTAAAACATGATCATGGTGATTATGGTGGGCATTATTATGTTGGTGGTCATGGACTGCCATCACATGGTAGCAAATCCTCTAGCCAACATTTTGGAAGTGGTGGTTTTAGTCACTATGATATCAAAAAAGTTTCAGGATATGATGAAGAAGCTGAGGAGGATATGGATGAGGAAGATGCAGTGCCTCCTAAGCAAGTTGGGTTGTTCAGCTTGTTTAGGTACTCAACAAAGTGGGATTGGTTACTTGTGTTTGTGGGGTGTTTAGGGGCTCTCATAAATGGAGGATCACTTCCTTTGTATTCTTATTTGTTTGGAAACTTGGTCACTCAGCTTTCAGGAGAAGCAGAAAATGATAAAAACAAGCTGTTGAAGGATGTAGAGAAGATATGCTTATCTATGACCTGGTTAGCTGCAATTGTGCTAGTTGGAGCATATTTGCAGATCACATGCTGGAGGTTAGTGGGGGAGAGAGCTGCTCAAAGAATAAGAACTGAGTACCTGAGAGCAGTTCTTAGACAGGACATAAGTTTTTTTGATACAGAGATTAATACTGGTGATATTATGCATGGAATTGCTAGTGATGTTGCACAAATTCAAGAAGTTATGGGAGAGAAGATGGCCCACTTTGTTCATCATGTATTTACATTCATATGTGGGTATGCAGTTGGGTTTAGAAGATCATGGAAAGTCTCTCTGGTGGTGTTCTCAGTCACCCCATTGACAATGTTCTGTGGTATGGCTTACAAAGCACTTTATGGTGGTCTAACAGCAAAAGAGGAAGCCTCTTATAGGAAAGCTGGTAGCATAGCAGAGCAGGCCATCAGTTCAATTAGGACAGTGTTTTCTTTTGTTGCTGAAAGCCAATTGGCTGAAAAATATGCTGAACTACTGCAAAAATCAGCCCCAATTGGAGCAAAAATTGGTTTTGCTAAAGGTGCAGGCATGGGTGTAATCTATTTAGTAACCTATTCAACATGGGCCTTGGCTTTTTGGTATGGCTCTATCTTAATTGCCAGGCACCAACTTGATGGAGGTGCAGCTATTGCTTGTTTCTTTGGTGTCAATGTAGGGGGAAGAGGCTTGGCACTGGCACTTTCATATTTTGCACAATTTGCACAAGGCACTGTTGCAGCAAGCCGTGTATTCTTCATTATAGAGAGAATCCCTGAGATTGATCCCTATAGTCCCGAGGGTAGGAAGCTATCTGTTGTTCGTGGAAGGATTGAGTTCAAGAATGTTAGTTTTGCATATCCATCTCGTCCTGATTCTTTGATACTTAATTCCCTCAATTTGGTGTTTCCATCTTCAAAAACTATGGCATTGGTTGGTGCAAGTGGAGGGGGCAAGTCCACTATCTTTGCTCTCATAGAGAGGTTTTATGACCCTATAGAAGGGATTATTACCTTGGATGGTCATGATTTGAGGACACTGCAAGTAAAGTGGCTAAGAGATCAGATTGGGATGGTTGGTCAGGAGCCAATTCTCTTTGCCACATCTATACTGGAAAATGTGATGATGGGGAAAGATAATGCCACCAAGGAAGAGGCAATTGCTGCTTGCATTGCTGCTGATGCTCATCGCTTCATATCTAGTCTGCCACTAAGCTATGACACTCAGGTTGGAGACAGGGGTACAAAACTCTCAGGAGGTCAAAAGCAGCGAATTGCATTGGCTAGAGCAATGATCAAAGATCCTAAAATCCTTCTTTTAGATGAACCAACTAGTGCTCTTGATGCTGAGTCAGAGTCTGCGGTCCAACGGGCCATTGACAAGATTTCTGCAGACCGAACAACCATTGTCATTGCTCACAGGATAGCAACAGTGAAGAATGCTCATGCCATTGTAGTTCTTGAACATGGTTCTGTCACTGAGATTGGTGACCATCGCCAACTTATGGGGAAAGCTGGAACCTACTACAACCTTGTCAAGCTTGCTACTGAAGCCATTTCAAAACCTCTCTCTAATGAAAATGGCATGCAAAAAACCAATGATTTATCCATCTATGATCAATCAGCTCCGGATATATCAAGATCACGACATGTAGTTGATATATCAAGGCCTAAAAACTTAAAATCTACACAGGAAGAGAAACAAGAAGAGATGGAAGATAAGCAAAACAAAAAACCAAGAAAATTCAGACTTTCTGAGGTATGGAAATTGCAAAAACCAGAAGCTGTGATGCTAATTTTTGGATTTCTTCTGGGAATGTTTGCAGGTGCTTTTCTGTCCCTTTTTCCATTGGTTTTAGGCATATCCCTTGGCGTATACTTTAATGATGACATTTCAAAGATGAAGAGAGATGTTGGATACCTTTGTATAGTACTTGTTGGCCTTGGATTTGGTTGTATAGTTTCCATGACAGGACAACAAGGTTTGTGTGGTTGGGCTGGATCAAAGTTGACACTGAGGGTTAGAAACCTCTTGTTTCAATCCATACTGAAACAAGAACCTGGGTGGTTTGATTTTGATGAAAACTCCACTGGAGTATTGGTGTCAAGGCTCTCATCAGACACTGTTAGTTTTCGTTCAGTACTTGGTGACCGGTTCTCAGTCCTTCTTATGGGGTTGAGTTCAGCTGCTGTTGGCCTTGGTGTGTCCTTTTTCTTTAATTGGAGACTAGCCCTTGTTGCAGCTGCTGTAACTCCTTTCACTCTTGGTGCAAGCTACATAAGTTTGATCATAAACATTGGTCCAAAAGTTGATAACAACTCTTATGCTAGAGCTAGCAATATTGCTTCTGGTGCAGTGTCAAACATAAGGACAGTTACTACATTTTCTGCTCATGAACAGATAGTTTACTCCTTTGATAGAGCCTTGTCAGAGCCCAGGAGAAAATCATTGAAAAGTTCACAACTTCAAGGTCTTTTATTTGGGTTCTTTCAAGGTGCCATGTATGGAGCATACACCTTAACTCTTTGGTTTGGTGCCTACCTTGTAGAACATGACAAAGGAGAATTTGAAGACGTGTATAAGATTTTTCTCATTCTTGTTTTGAGCTCATTTTCTGTGGGACAACTAGCTGGATTAGCACCTGATACTTCTATGGCCGCTACAGCAATTCCTGCAGTTCAAGATATCATAAATAGAAGGCCACTGATAGGCAATGATAGAACAAAAAGTGGAAAGGTAGAAAGATCAAAGCCTTTCAAAATAGAATTCAAACTGGTTACATTTGCATACCCATCTAGGCCTGAGGTAACTGTGTTGAGGGATTTCAGTTTGAAGATCAAAGGTGGAAGCACAGTGGCCTTGGTTGGACCAAGTGGATCAGGAAAATCAACTGTCATATGGCTGACACAAAGGTTCTATGATCCAGATCAAGGAAAGGTCACGATGAGTGGGGTAGATTTGAGGGAGCTTGATGTGAAGTGGTTGAGGAGGCAAATAGCTTTGGTGGGTCAAGAACCTGCACTGTTTGCTGGGAGCATAAGGGATAATATTGCATTTGGGGACCCAAGTGCTTCATGGACTGAGATTGAAGTGGCTGCAAAAGAGGCTTACATCCACAAGTTCATCAGTGGCCTTCCTCAGGGTTATGAAACCCAGGTTGGTGAAAGCGGGGTCCAGTTATCAGGTGGTCAGAAACAAAGAATTGCTATAGCAAGGGCCATACTGAAGAAATCAAGGGTGCTTCTGCTTGATGAAGCAAGCAGTGCCTTGGACTTGGAATCAGAGAAGCACATCCAAGATGCCCTTAAGAATGTTTCCAAAGAGGCAACAACCATAATAGTTGCACACCGTCTTTCCACAATCAGAGAAGCTGATAGAATAGCAGTTATGAGAGATGGGGAAGTGGTGGAGTATGGAAGCCATGACACTCTCATTGCTTCCCTTCAAAATGGTTTGTATGCTAGCCTAGTTCGAGCTGAGACTGAATCCAATGCCTTTGCTTGA 4530 0.423 MADSSFEIGNYYSSSHHRRHYPTPVSHGSVSGSGSFIPSSSRSNATSRTKGARQRRVPSTPFASDDDHSWQGEVSWKFEATGWREYSTNFGSVLSPWPASSPSDHSRVFRQSANDYYLSRTSRFRGITNSSYEHSSYGRVELRSHVARDNDHSYFDQHSGFSKLGIIKEGGNRKGRSSPLAEEDELSMIDYSITDEHVITPSRNGHDLELSYVKHDHGDYGGHYYVGGHGLPSHGSKSSSQHFGSGGFSHYDIKKVSGYDEEAEEDMDEEDAVPPKQVGLFSLFRYSTKWDWLLVFVGCLGALINGGSLPLYSYLFGNLVTQLSGEAENDKNKLLKDVEKICLSMTWLAAIVLVGAYLQITCWRLVGERAAQRIRTEYLRAVLRQDISFFDTEINTGDIMHGIASDVAQIQEVMGEKMAHFVHHVFTFICGYAVGFRRSWKVSLVVFSVTPLTMFCGMAYKALYGGLTAKEEASYRKAGSIAEQAISSIRTVFSFVAESQLAEKYAELLQKSAPIGAKIGFAKGAGMGVIYLVTYSTWALAFWYGSILIARHQLDGGAAIACFFGVNVGGRGLALALSYFAQFAQGTVAASRVFFIIERIPEIDPYSPEGRKLSVVRGRIEFKNVSFAYPSRPDSLILNSLNLVFPSSKTMALVGASGGGKSTIFALIERFYDPIEGIITLDGHDLRTLQVKWLRDQIGMVGQEPILFATSILENVMMGKDNATKEEAIAACIAADAHRFISSLPLSYDTQVGDRGTKLSGGQKQRIALARAMIKDPKILLLDEPTSALDAESESAVQRAIDKISADRTTIVIAHRIATVKNAHAIVVLEHGSVTEIGDHRQLMGKAGTYYNLVKLATEAISKPLSNENGMQKTNDLSIYDQSAPDISRSRHVVDISRPKNLKSTQEEKQEEMEDKQNKKPRKFRLSEVWKLQKPEAVMLIFGFLLGMFAGAFLSLFPLVLGISLGVYFNDDISKMKRDVGYLCIVLVGLGFGCIVSMTGQQGLCGWAGSKLTLRVRNLLFQSILKQEPGWFDFDENSTGVLVSRLSSDTVSFRSVLGDRFSVLLMGLSSAAVGLGVSFFFNWRLALVAAAVTPFTLGASYISLIINIGPKVDNNSYARASNIASGAVSNIRTVTTFSAHEQIVYSFDRALSEPRRKSLKSSQLQGLLFGFFQGAMYGAYTLTLWFGAYLVEHDKGEFEDVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVQDIINRRPLIGNDRTKSGKVERSKPFKIEFKLVTFAYPSRPEVTVLRDFSLKIKGGSTVALVGPSGSGKSTVIWLTQRFYDPDQGKVTMSGVDLRELDVKWLRRQIALVGQEPALFAGSIRDNIAFGDPSASWTEIEVAAKEAYIHKFISGLPQGYETQVGESGVQLSGGQKQRIAIARAILKKSRVLLLDEASSALDLESEKHIQDALKNVSKEATTIIVAHRLSTIREADRIAVMRDGEVVEYGSHDTLIASLQNGLYASLVRAETESNAFA* 1510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01794 1509 CDD ABC_6TM_Pgp_ABCB1_D1_like 296 593 - -
Rops4g01794 1509 MobiDBLite consensus disorder prediction 14 68 - -
Rops4g01794 1509 FunFam ABC transporter B family member 1 1253 1503 - -
Rops4g01794 1509 FunFam ABC transporter B family member 1 610 858 - -
Rops4g01794 1509 Pfam ABC transporter 1281 1429 IPR003439 GO:0005524
Rops4g01794 1509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1259 1500 IPR027417 -
Rops4g01794 1509 CDD ABC_MTABC3_MDL1_MDL2 620 857 - -
Rops4g01794 1509 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 620 856 IPR003439 GO:0005524
Rops4g01794 1509 SUPERFAMILY ABC transporter transmembrane region 276 605 IPR036640 GO:0005524|GO:0016020
Rops4g01794 1509 Gene3D - 1261 1503 IPR027417 -
Rops4g01794 1509 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 1114 1254 - -
Rops4g01794 1509 Gene3D ABC transporter type 1, transmembrane domain 282 875 IPR036640 GO:0005524|GO:0016020
Rops4g01794 1509 Pfam ABC transporter 638 787 IPR003439 GO:0005524
Rops4g01794 1509 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1263 1499 IPR003439 GO:0005524
Rops4g01794 1509 ProSitePatterns ABC transporters family signature. 1402 1416 IPR017871 GO:0005524|GO:0016887
Rops4g01794 1509 Pfam ABC transporter transmembrane region 940 1211 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops4g01794 1509 Pfam ABC transporter transmembrane region 295 567 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops4g01794 1509 PANTHER ABC TRANSPORTER B FAMILY 254 856 IPR039421 -
Rops4g01794 1509 Gene3D - 610 858 IPR027417 -
Rops4g01794 1509 MobiDBLite consensus disorder prediction 898 919 - -
Rops4g01794 1509 ProSitePatterns ABC transporters family signature. 759 773 IPR017871 GO:0005524|GO:0016887
Rops4g01794 1509 SMART AAA_5 1290 1476 IPR003593 GO:0016887
Rops4g01794 1509 SMART AAA_5 647 848 IPR003593 GO:0016887
Rops4g01794 1509 Gene3D ABC transporter type 1, transmembrane domain 888 1106 IPR036640 GO:0005524|GO:0016020
Rops4g01794 1509 Gene3D ABC transporter type 1, transmembrane domain 1113 1260 IPR036640 GO:0005524|GO:0016020
Rops4g01794 1509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 611 856 IPR027417 -
Rops4g01794 1509 CDD ABC_6TM_Pgp_ABCB1_D2_like 930 1245 - -
Rops4g01794 1509 SUPERFAMILY ABC transporter transmembrane region 929 1243 IPR036640 GO:0005524|GO:0016020
Rops4g01794 1509 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 296 585 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops4g01794 1509 MobiDBLite consensus disorder prediction 26 54 - -
Rops4g01794 1509 CDD ABC_MTABC3_MDL1_MDL2 1263 1501 - -
Rops4g01794 1509 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 941 1227 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01794 Rops-Chr4 42182005 42191176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01794 970 1509 Calmodulin-binding Proteins AT2G36910 37.638 3.54e-101 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01794 K05658 - gmx:100816700 2376.28