Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01792 ATGGACGACGACGACGATATCCAGTCACATCCTTCGCCGGTAAGCGGATCGCCGGCTTCGTCGCCGAGAGCCAACGGTAGGATAACGGTGGCGGTTGCGGCACCGGCGCCGCAGACGCAGCCGGCGCCGAACAGCCTTGCATTAGCGCTTCCGATTCAGCAGTCGGCGAGAGGAAACAACGGTGGAGGTGGCGGAGGAAGAGAGGATTGCTGGAGCGAAGGTGCGACGGCGGTTCTGATCGACGCTTGGGGAGAGAGATATCTTGAACTTAGCAGAGGGAATTTGAAGCAGAAGCACTGGAAGGAGGTTGCGGAGATCGTTAGTGGAAGAGAGGATTACACTAAGGCGCCGAAAACTGATATCCAGTGCAAGAACCGGATTGACACCGTTAAGAAGAAGTACAAATCGGAGAAAGCGAAGATCGCCGCCGCAGGCGGCGGAGTAACCAGCAAATGGCCGTTCTTCGAGCGGTTGGACCAGTTAATCGGTCCGACCGCTAAGATCCCCGGCGTAACCGGCACCAGCGCCGCTGGGAACAGTAATTTACAGCCGCAGAAAGTTCCGTTAGGGATTCCGGTGGGAACCCGCGGCGGTGTGAATCAATTTCATCCTCAAAAGCAACCACAACCGCAACCGCATCAGCAGCAGCAACTGGTTCCGTTCAAGAACCAGAAGATTCAGTTCCGGCGACGTGCTCCTCTGGCGGATTCCGATTCGTCAGAAAGAGAAGCGTCGTCGCCGGTGTCGAGCGACAGTTTTCCGCCGGAAAACTACGAGAGAAAAAGAGCAAGATTAATGAATCCGAATGCTGTGAAGGGAAAGGAAGGAGGAAGAAAAGGAAAAGGTTGGGGAGGTGCTGTGAGAAAATTGACTCAAGCGATTCTCAAATTTGGTGAAGCATATGAACAAGCTGAGACCTCAAAGTTACAGCAAGTGGTGGAGATGGAGAAACAGAGGATGAAGTTTGCAAAGGATTTGGAATTGCAGAGAATGCAGTTTTTCATGAAGACTCAGCTGGAGATTTCACAGCTCAAGCTTGGGAAGAAAGGTGGTAACCCAAGCAATCCCCATAACAACAATAACAACAACCATAACAATAATAGTGACAGTGAGTGA 1116 0.5224 MDDDDDIQSHPSPVSGSPASSPRANGRITVAVAAPAPQTQPAPNSLALALPIQQSARGNNGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVAEIVSGREDYTKAPKTDIQCKNRIDTVKKKYKSEKAKIAAAGGGVTSKWPFFERLDQLIGPTAKIPGVTGTSAAGNSNLQPQKVPLGIPVGTRGGVNQFHPQKQPQPQPHQQQQLVPFKNQKIQFRRRAPLADSDSSEREASSPVSSDSFPPENYERKRARLMNPNAVKGKEGGRKGKGWGGAVRKLTQAILKFGEAYEQAETSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQLEISQLKLGKKGGNPSNPHNNNNNNHNNNSDSE* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01792 371 MobiDBLite consensus disorder prediction 344 371 - -
Rops4g01792 371 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 37 346 IPR044823 -
Rops4g01792 371 MobiDBLite consensus disorder prediction 38 60 - -
Rops4g01792 371 MobiDBLite consensus disorder prediction 255 282 - -
Rops4g01792 371 MobiDBLite consensus disorder prediction 10 24 - -
Rops4g01792 371 FunFam trihelix transcription factor ASIL2 71 136 - -
Rops4g01792 371 Pfam Myb/SANT-like DNA-binding domain 68 161 IPR044822 -
Rops4g01792 371 MobiDBLite consensus disorder prediction 200 223 - -
Rops4g01792 371 MobiDBLite consensus disorder prediction 172 186 - -
Rops4g01792 371 MobiDBLite consensus disorder prediction 1 70 - -
Rops4g01792 371 MobiDBLite consensus disorder prediction 348 371 - -
Rops4g01792 371 Gene3D - 71 136 - -
Rops4g01792 371 MobiDBLite consensus disorder prediction 239 253 - -
Rops4g01792 371 MobiDBLite consensus disorder prediction 170 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01792 Rops-Chr4 42162455 42163924 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01792 1 360 Trihelix Transcription Factor Family AT3G14180 48.409 1.88e-110 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Rops4g01792 Myb_DNA-bind_4 1.2e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01792 - - gmx:100812599 510.76