Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01787 ATGGGAGCAAGAGAAAGCAAGTTAAGGAAATGGGGTGGTGGTGGTGGCAGTGCTGCTCACAAACGCATAACTAAAGGTTATGTTCCAATCTGTGTTGGCACAAATGAAGATACTTGTAAGCATTATATGGTTCCCACTAGAGCACTTTGTGATGTAGATTTCTGCATATTGTTGTATATGTCTGCAGAGGAATATGGGTTTAGGAATGATGGGGTTCTCAGGATCCCATTTGAAGCACAAGATTTTGAAGAATGGTTCATCAGAAAGTCCAACAAAAAGATTAAAATTAAGAGGAGGGTGAAGCCAACTTGA 312 0.4038 MGARESKLRKWGGGGGSAAHKRITKGYVPICVGTNEDTCKHYMVPTRALCDVDFCILLYMSAEEYGFRNDGVLRIPFEAQDFEEWFIRKSNKKIKIKRRVKPT* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01787 103 Pfam Auxin responsive protein 17 84 IPR003676 GO:0009733
Rops4g01787 103 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 19 84 IPR003676 GO:0009733
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01787 23 83 Calmodulin-binding Proteins AT2G24400 42.623 7.49e-10 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01787 K14488 - gmx:102666083 120.168