Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01786 ATGGCCAGAGTTGGAAAGCTAACAAAGCTTAAGTCAGCCATCAAAAGGTGGCCATCATTGACCAAACTCAGCCGCAACAACAGCTCTGTCTCTTCTTCCTACAAAGAAGGTGGTGCTTCGTCCTTCAAGGAACAAGAACAAGACCAAGACCAGGACCTTCACACAGTCTATGTTGGCAAATCAAGGCGGCGCTACCTCGTAAACTCCGAAGTCATCAATCACCCTGTGTTTCAAGAGCTAGTGGACAGGTCTTCTCCTTCTTCTAATGGCTGTGATGATGGGGTGGTTGTTTCTTGTGAGGTTGTGCTTTTTGAGCACTTGTTATGGATGCTTGAAAGTGCTGAGACTCAATTGGGGTCCATGGATGAGCTTGTTGAGTTCTACACTTGTGCATGCTGA 399 0.4687 MARVGKLTKLKSAIKRWPSLTKLSRNNSSVSSSYKEGGASSFKEQEQDQDQDLHTVYVGKSRRRYLVNSEVINHPVFQELVDRSSPSSNGCDDGVVVSCEVVLFEHLLWMLESAETQLGSMDELVEFYTCAC* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01786 132 MobiDBLite consensus disorder prediction 24 50 - -
Rops4g01786 132 MobiDBLite consensus disorder prediction 24 40 - -
Rops4g01786 132 Pfam Auxin responsive protein 16 111 IPR003676 GO:0009733
Rops4g01786 132 PANTHER EXPRESSED PROTEIN 25 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01786 Rops-Chr4 42119864 42120672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01786 3 116 Calmodulin-binding Proteins AT4G34750 21.739 3.80e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01786 - - gmx:100797158 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01786 4 42119864 42120672 Rops4g01786 4 42119864 42120672 ECH