Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01775 ATGTCTCTATTGGCTTTCTATCTGAGCTCTTTTATTCTCAACTCTCGTCACTCACTTTCCCAAAGCATCACCACCTACCTGCCTGAAAAGCACAGAGCCTTATTCATATTTGGAGATTCATTGTTTGATGCTGGAAACAATAACTACATTAATGCCACCACTTTTTTGCAGGCAAATTATCCACCATATGGGGAAACTTTCTTCAAGTATCCCACTGGAAGATTTTCTGATGGTCGTGTCATCCCAGATTTCATTGCTGAGTATGCAAAGTTGCCACTAATTCCTCCATACCTGCATCCTGGATATGACCTTGATCAGTACATTTATGGAGTCAATTTTGCATCAGCGGGAGCTGGCGCTTTAGTTGAAACCCGTCGAGGAAGGGTGATAGACTTTAAAACTCAGGCAAATTACTTCAAAAGAGTCAGCAAGAAATTAAGGCCGAAACTAGGAGATGTGGAAGCCAAAAAATTGCTCTCCAGAGCTGTTTACTTGATTAACATAGGAGGCAATGACTATGCCATCCCTTTCATTACAAACTCAACAAGTGGAGTGGTTCTTCCATACCCTCAACAAGTATTTGTAGACTTCGTCATTGGCAACATTTCAGTTGCAATCAAAAAGCTACAGAAACAGCTAAAGGGATTCAGATACTCAATTACTGACTTCTACGGTGCACTTATTGAATTAATGAAGTACCCTTCAAAATATGGTTTCGAAGAGGGGAATGCAGCATGTTGTGGAGGTGGTCCTTACAGAGGAGATCTTAGTTGCGGAGGGAAAAAGGGGATTGAAAAGTATGAACTATGTAACAATGTTAATAAGTATGTATACTTTGATTCTGTTCATCCAACTGAGAGTGCTGCTGAGCATTTCGCCAAGCTAATGTGGAGTGGTAATAGAGATGTCATTGAGTCTTATAATCTGAAACAGTTGTTTCACGACGTTTGA 951 0.4038 MSLLAFYLSSFILNSRHSLSQSITTYLPEKHRALFIFGDSLFDAGNNNYINATTFLQANYPPYGETFFKYPTGRFSDGRVIPDFIAEYAKLPLIPPYLHPGYDLDQYIYGVNFASAGAGALVETRRGRVIDFKTQANYFKRVSKKLRPKLGDVEAKKLLSRAVYLINIGGNDYAIPFITNSTSGVVLPYPQQVFVDFVIGNISVAIKKLQKQLKGFRYSITDFYGALIELMKYPSKYGFEEGNAACCGGGPYRGDLSCGGKKGIEKYELCNNVNKYVYFDSVHPTESAAEHFAKLMWSGNRDVIESYNLKQLFHDV* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01775 316 CDD SGNH_plant_lipase_like 33 300 IPR035669 -
Rops4g01775 316 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 20 210 IPR044552 -
Rops4g01775 316 Gene3D SGNH hydrolase 211 301 IPR036514 -
Rops4g01775 316 Gene3D SGNH hydrolase 24 210 IPR036514 -
Rops4g01775 316 SUPERFAMILY SGNH hydrolase 34 299 - -
Rops4g01775 316 Pfam GDSL-like Lipase/Acylhydrolase 34 176 IPR001087 GO:0016788
Rops4g01775 316 Pfam GDSL-like Lipase/Acylhydrolase 205 295 IPR001087 GO:0016788
Rops4g01775 316 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 34 45 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01775 Rops-Chr4 42011209 42014708 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01775 33 294 Pollen Coat Proteome AT1G75910 28.882 4.60e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01775 - - cave:132187683 355.525