Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01771 ATGGCTCCATCTCCCTCTTTCAATCTCTCCCTTATTTTCTTGTTCTTCATTGCCACACTCTCTCTTCAACCTTCTTCTTCTTCTTCTTCTTCTGACGCAGAAAAGAAAACGTTCATAATCCAAGTTCAACATGAAGCAAAACCTTCTATTTTCCCAACCCATAAGCACTGGTACGAGTCCTCACTCTCCTCCATATCCACCACCACCTCCATTATCCACACATACGACACCGTTTTCCACGGTTTCTCTGCAAAGCTCTCACCTTTAGAGGCACAGAAGCTTCAAACACTCTCCCACGTCATCACCCTCATACCAGAACAAGTTCGCAAACTCCACACCACTCGTTCTCCTCAGTTTCTGGGTCTCAAAACCGCTGACAGAACCGGGTTGCTCCATGAAACCGATTTCGGGTCGGATCTTGTAATCGGAGTTATCGACACCGGAATCTGGCCGGAGAGGCAGAGCTTCAACGACCGTGATATGGGTCCCGTTCCCCCCAAATGGAAAGGACAATGCGTCGCCGGAGAAGACTTTTCGGCGAGTTTATGCAACCGGAAACTCATCGGAGCAAGGTATTTCTCTTCCGGGTACGAATCCACCAACGGGAAAATGAACGAGACGACGGAGTATCGTTCTCCGAGGGACTCCGACGGTCACGGGACGCACACGGCGTCGATCGCCGCCGGCAGGTACGTGTCTCCGGCATCAACATTGGGTTACGCAAAAGGGGTCGCCGCCGGTATGGCTCCGAAGGCTCGCCTCGCCGTGTACAAGGTTTGCTGGAACGGCGGCTGCTACGACTCAGACATTCTCGCGGCTTTCGACGCCGCCGTGTCGGACGGTGTCGACGTGGCGTCACTAAGTGTCGGAGGTGTGGTGGTGCCTTACCACCTTGATGTTATTGCTATCGGTGCTTTTGGGGCCACAAACGCCGGCGTTTTTGTCTCCTCTTCGGCCGGCAACGGCGGTCCCGGTGGCCTCACCGTCACCAATGTGGCACCTTGGGTTACCACAGTTGGTGCTGGAACCATAGATAGAGATTTCCCTGCTGATGTGAAGCTTGGAAATGGTAAAATCATACCTGGGGTTAGTATTTATGGTGGACCGGGTCTAACTCCGGGTCGGATGTACCCAATTGTGTATTCGGGTACTGACCAAGGTGGGTCCCCCGGGAGTGGTGATGGTTATTCATCTTCACTTTGTTTGGAAGGTTCTTTGGATCCTAAGTTTGTAAAAGGCAAGATTGTTGTTTGTGATAGAGGGATTAACTCGAGAGCTGCCAAAGGTGAAGTAGTGAAAAAATCAGGTGGAATTGGCATGATTTTGGCTAATGGGGTGTTTGATGGTGAAGGGTTAGTGGCTGATTGCCACGTGCTACCCGCCACCGCCGTTGGTGCCACCTGCGGTGATGAAATCCGGAGTTACATTGCGGCGGCGGGTAAATCAAGATCACCACCAACTGCCACCATTGTTTTTAAGGGAACTAGGCTTGATGTTAGGCCAGCACCTGTGGTGGCATCATTTTCAGCTAGAGGGCCTAACCCTGAATCACCTGAGATTTTGAAGCCAGATGTTATAGCGCCTGGTTTGAACATTCTTGCAGCTTGGCCTGATAGAGTTGGACCTTCTGGGGTACCTTCTGATGGAAGAAGGACTGAGTTTAACATATTGTCTGGTACTTCAATGGCTTGTCCTCATGTTTCTGGTTTGGCTGCTTTGTTGAAAGCAGCTCATCCAGATTGGAGTCCTGCTGCTATTAGGTCAGCTTTGATGACCACAGCTTATACTGTGGATAATAGGGGTCATACCATGTTGGATGAGTCTACTGGGAATGTTTCCTCAGTGTTTGATTATGGTGCTGGTCATGTTCATCCAGAGAAGGCCATGGACCCAGGGTTGGTTTATGATATTTCCACTTTTGATTATGTGGATTTCTTGTGTAATTCTAATTATACCACTAAGAGTATCCAAGTGATCACAAGGAAAGGTGCTGATTGTAGTGGGGCAAAGAAGGCTGGACATGCTGGGAATTTGAATTATCCATCTTTGTCTGCAGTGTTTCAGCAATATGGAAAGCGTAAAATGTCTACACACTTTATTAGATCTGTGACCAATGTTGGTGACCCCAATTCAGTCTACAAAGTAACCATTAAACCACCAGCTGGAATGGTGGTCACAGTGCAACCAGAGACCCTATCTTTCAGGAGGGTGGGTCAGAAGTTGAACTTTCTTGTTAGGGTTCAAACTAGGGCGGTGAAGCTTTCACCAGGAAGTTCTAGTGTGAAGAGTGGTTCCATAGTTTGGTCTGATGGAAAGCATATTGTCACAAGTCCCTTAGTTGTGACAATGCAGCAACCACTGGATTAG 2367 0.4901 MAPSPSFNLSLIFLFFIATLSLQPSSSSSSSDAEKKTFIIQVQHEAKPSIFPTHKHWYESSLSSISTTTSIIHTYDTVFHGFSAKLSPLEAQKLQTLSHVITLIPEQVRKLHTTRSPQFLGLKTADRTGLLHETDFGSDLVIGVIDTGIWPERQSFNDRDMGPVPPKWKGQCVAGEDFSASLCNRKLIGARYFSSGYESTNGKMNETTEYRSPRDSDGHGTHTASIAAGRYVSPASTLGYAKGVAAGMAPKARLAVYKVCWNGGCYDSDILAAFDAAVSDGVDVASLSVGGVVVPYHLDVIAIGAFGATNAGVFVSSSAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPADVKLGNGKIIPGVSIYGGPGLTPGRMYPIVYSGTDQGGSPGSGDGYSSSLCLEGSLDPKFVKGKIVVCDRGINSRAAKGEVVKKSGGIGMILANGVFDGEGLVADCHVLPATAVGATCGDEIRSYIAAAGKSRSPPTATIVFKGTRLDVRPAPVVASFSARGPNPESPEILKPDVIAPGLNILAAWPDRVGPSGVPSDGRRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGHTMLDESTGNVSSVFDYGAGHVHPEKAMDPGLVYDISTFDYVDFLCNSNYTTKSIQVITRKGADCSGAKKAGHAGNLNYPSLSAVFQQYGKRKMSTHFIRSVTNVGDPNSVYKVTIKPPAGMVVTVQPETLSFRRVGQKLNFLVRVQTRAVKLSPGSSSVKSGSIVWSDGKHIVTSPLVVTMQQPLD* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01771 788 Gene3D - 345 498 - -
Rops4g01771 788 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Rops4g01771 788 PRINTS Subtilisin serine protease family (S8) signature 558 574 IPR015500 -
Rops4g01771 788 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Rops4g01771 788 FunFam Subtilisin-like protease SBT1.5 139 355 - -
Rops4g01771 788 Pfam Subtilase family 137 610 IPR000209 GO:0006508|GO:0008236
Rops4g01771 788 CDD PA_subtilisin_like 351 490 - -
Rops4g01771 788 Pfam Peptidase inhibitor I9 37 112 IPR010259 -
Rops4g01771 788 CDD Peptidases_S8_3 110 595 IPR034197 -
Rops4g01771 788 FunFam Subtilisin-like protease SBT1.9 26 112 - -
Rops4g01771 788 Gene3D Peptidase S8/S53 domain 139 642 IPR036852 GO:0004252|GO:0006508
Rops4g01771 788 Pfam PA domain 378 471 IPR003137 -
Rops4g01771 788 FunFam Subtilisin-like protease SBT1.5 646 784 - -
Rops4g01771 788 Gene3D - 646 784 - -
Rops4g01771 788 FunFam subtilisin-like protease SBT1.5 345 497 - -
Rops4g01771 788 SUPERFAMILY Subtilisin-like 111 633 IPR036852 GO:0004252|GO:0006508
Rops4g01771 788 ProSiteProfiles Serine proteases, subtilase domain profile. 116 629 - -
Rops4g01771 788 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 64 781 IPR045051 -
Rops4g01771 788 ProSitePatterns Serine proteases, subtilase family, serine active site. 559 569 IPR023828 -
Rops4g01771 788 Pfam Fibronectin type-III domain 677 781 IPR041469 -
Rops4g01771 788 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 112 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01771 Rops-Chr4 41926176 41928542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01771 37 787 Subtilisin-like Serine Gene Family AT3G14240 78.117 0.0 1209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01771 - - gmx:100819529 1335.09