Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01765 ATGTTTGATAGTAGCGGAACGGAGAAGGAACAAAACGACGACGCATTGAAGAAGGGGTTAGTGCTCTCTCCAATGGAGGATCCGAATCCGAAGATATCAGCGTACTACCAGACGAGGTTGGCACACTTCGGCGTTGTAAGCACCGAATGGCTGGCTCAGGCCGAGTCCGCTGTCGCCGGCGCCAACCACACACCGCCATCATCAGACATCGACGACGGCGATACCAAATTCTCTGTGATCGAGGAGTTCAACACGTGGCGGAGGAACCCTGATTTGGCAGAGGCCGTGGCCGCCATTCGCGCCTTGGCTGCCGTTATAAGCTCCAGCAAAGCCTCCACCATGATGCAGCTCGAAATCGAACTCAAGAACGCTTCCGATTCTCTCAAATCATGGGATACGACCTCTATCTCATTGACAGCAGCGTGTGATCTGTTTATGAGATATGTGACTAGGACTTCTGCTTTGGAATATGAAGACTTCAATTCAGCAAAGTCTCGTTTGATTGAACGTGCTGAAAAGTTTGGTGAAATTTCCTTCAAGGCTCGCAAGGTTATTGCAGTGCTGAGTCAAGATTTTATATTTGATGGTTGTACCATTTTGGTTCATGGTTTTTCCAGAGTTGTCTTACAAGTTCTTATACTCGCTGCACAGAATAAGAAACTGTTTAGGGTATTCTGCACAGAGGGGAGACCAGACCGAACAGGTTTACGGTTGTCCAATGAGCTGGCCAAGCTTGATGTTCCTGTGAAACTTGTAATAGACTCTGCAGTGGCATATACTATGGATGAGGTGGACATGGTATTTGTTGGGGCAGATGGAGTTGTTGAAAGCGGTGGTATAATCAACATGATGGGGACATACCAAATCGCATTGGTTGCAAAGAGTATGAATAAGCCAGTTTATGTGGCTGCTGAAAGCTACAAGTTTGCTCGTCTTTACCCTCTAGACCAAAAGGATTTAGCCCCCGCCTTACGCCCAGTTGATTTTGGTGTACCTATTCCATCCAAGGTTGAGGTTGAATGTTCTGCCCGGGATTATACTCCTCCTCAATATCTGACTCTGCTTTTCACAGATTTAGGTGTTCTTACTCCATCAGTTGTTAGTGATGAGCTCATCCAGCTATACTTGTAG 1131 0.4686 MFDSSGTEKEQNDDALKKGLVLSPMEDPNPKISAYYQTRLAHFGVVSTEWLAQAESAVAGANHTPPSSDIDDGDTKFSVIEEFNTWRRNPDLAEAVAAIRALAAVISSSKASTMMQLEIELKNASDSLKSWDTTSISLTAACDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISFKARKVIAVLSQDFIFDGCTILVHGFSRVVLQVLILAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLVIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAKSMNKPVYVAAESYKFARLYPLDQKDLAPALRPVDFGVPIPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01765 376 Gene3D - 180 376 IPR042529 -
Rops4g01765 376 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 44 376 - -
Rops4g01765 376 MobiDBLite consensus disorder prediction 1 16 - -
Rops4g01765 376 Gene3D - 75 177 IPR042528 -
Rops4g01765 376 Coils Coil 114 134 - -
Rops4g01765 376 MobiDBLite consensus disorder prediction 1 23 - -
Rops4g01765 376 FunFam Translation initiation factor eIF-2B subunit alpha 75 177 - -
Rops4g01765 376 SUPERFAMILY NagB/RpiA/CoA transferase-like 64 375 IPR037171 -
Rops4g01765 376 FunFam Translation initiation factor eIF-2B subunit alpha 180 376 - -
Rops4g01765 376 Pfam Initiation factor 2 subunit family 92 364 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01765 Rops-Chr4 41822931 41825685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01765 26 376 Eukaryotic Initiation Factors Gene Family AT1G53880 80.966 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01765 K03239 - gmx:102669842 591.267