Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01745 ATGATGGTGGATCCAAGGCTGGTGCTGGTGCTCATCAGCACTTGCATTCTGGCCATCAACGGTGAAACAGATCCAAATGATGCTGCTTCTCTAAAGGTTATGTTTCAAAGTATGAACTCACCACCCCAGCTAAATTGGGATGCAAATAGTAATGATCCTTGTGGACAGTCTTGGAAAGGCATCGTTTGCTCAGGCAACCGAGTCACAGCGATTAAGTTACCTGGTCTTGGACTAACTGGATCTTTGGGTTACCAGCTACAACCCTTGACATCTGTGACAACCCTAGACATGAGTAACAACAATCTTGGTGGCACCATGCCATACCAACTTCCTCCAAACTTGCAGCACTTAAATCTTGCTAATAATAATTTCAATGGGGGGATACCCTATTTTATATCTGATATGACTTCTCTTATAGACCTGAATCTTGGTCACAATCAGCTCCAGCAACTGAGTGTTGACTTTCAAAAGCTTTCTTCCCTCTCTACATTGGATCTCTCGTTCAATTCTTTGACAGGTGACCTCCCTCAGACTATGAGCTCACTTTCAAGCATAACCACCATGTATCTGCAAAACAACCAGTTTACAGGCACCATTAATGTCCTTGCTAATCTGCCTCTTGAGAAACTGAATGTGGAAAACAATCATTTTACAGGCTGGGTACCAGAACAGTTGAAATCCATAGACCTACAAAAGGATGGTAATACATGGAGCTCAGGACCTGCACCCCCACCTCCTCCTGGGACACCTCCAATAACAAAAAGCAACAGAAATCACAGGTCTGGTGGACATGGCACCTCATCGGATGCTGACTCAAGTGATGGAGGCAAAAAATCTGGTATAGGAGGTGGTGCCATTGCTGGAATAGTGATCTCCATCTTAGTTGTTGGGGCAATAGTAGCATTCTTTCTGGTGAAGAGAAAATCCAAGAAGTCATTTTCGGATGTGGAAAAGCTTGACAATCAGCCCTTGGCTCCTTCAAATGAAGTGCATCATGAAATGAACCCCACACAAGCTTCTTCTGTAATAGACTTGAAGACATTTGATACTTCTGCGGAAGCAATAAGTCTTAAACCCCCACCTTTTGATCGTAATAAATTATTTGATGAGGATGAGTTTTCAAAGAAGCCCCCTGCTGTCAAGAAGACCATAACAGCTCCTGCAAATGTGAAATCATATTCTATAGCTGACCTACAGATTGCTACTGGAAGCTTCAGTGTGGATCAACTTATTGGTGAGGGGTCTTTTGGACGTGTATACCGTGCTCAATTTGATGATGGAAAGGTTCTTGCTGTGAAGAAGATAGATTCATCTGTCCTTCCCAATGGTTTGTCTGAAGATTTTGCAGAACTAGTTTCAAACATCTCCCATTTGCATCATCCCAATGTGACAGAGCTTGTAGGTTATTGTTCAGAGCATGGGCAACACCTCCTAGTGTATGAGTTTCATAAAAATGGATCACTGCATGACTTCCTTCACCTTCCTGATGAGTATACTAAACCATTGATATGGAATTCACGTGTCAAGATTGCTTTGGGGACTGCACGTGCTTTAGAGTACCTACATGAAGTTTGTTCTCCATCAGTCGTTCATAAGAATATTAAGTCAGCCAACATATTGCTTGATGCAGATGTTAATCCTCATCTTTCTGACAGTGGATTGACCAGCTATATTCCAAATGCAAACCAGGTGTTGAACAATAATGCTGGATCTGGATACGAAGCTCCCGAAGTTGGCTTGTCTGGTCAGTACACTCTCAAGAGTGATATCTACAGCTTTGGAGTTGTCATGTTGGAACTTCTCACTGGACGGAAACCATTTGATAGCTCAAGGCCAAGGTTTGAGCAGTCTTTGGTTCGATGGGCAACCCCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCACTTGAAGGGTTATACCCTGTCAAGTCTCTTTCTCGATTTGCTGATGTTATTGCTCTTTGTGTTCAGTCGGAACCTGAATTCCGACCACCTATGTCAGAAGTGGTTCAAGCACTGGTTCGATTAGTGCAACGAACTAACATGAGCAAGAGGACATTTGGAACTGATCAAGGAGGAAACCAACGAGGGGGTGGTGATGACCAAGAAACACAAGACATGTAA 2136 0.4312 MMVDPRLVLVLISTCILAINGETDPNDAASLKVMFQSMNSPPQLNWDANSNDPCGQSWKGIVCSGNRVTAIKLPGLGLTGSLGYQLQPLTSVTTLDMSNNNLGGTMPYQLPPNLQHLNLANNNFNGGIPYFISDMTSLIDLNLGHNQLQQLSVDFQKLSSLSTLDLSFNSLTGDLPQTMSSLSSITTMYLQNNQFTGTINVLANLPLEKLNVENNHFTGWVPEQLKSIDLQKDGNTWSSGPAPPPPPGTPPITKSNRNHRSGGHGTSSDADSSDGGKKSGIGGGAIAGIVISILVVGAIVAFFLVKRKSKKSFSDVEKLDNQPLAPSNEVHHEMNPTQASSVIDLKTFDTSAEAISLKPPPFDRNKLFDEDEFSKKPPAVKKTITAPANVKSYSIADLQIATGSFSVDQLIGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNGLSEDFAELVSNISHLHHPNVTELVGYCSEHGQHLLVYEFHKNGSLHDFLHLPDEYTKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDADVNPHLSDSGLTSYIPNANQVLNNNAGSGYEAPEVGLSGQYTLKSDIYSFGVVMLELLTGRKPFDSSRPRFEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQSEPEFRPPMSEVVQALVRLVQRTNMSKRTFGTDQGGNQRGGGDDQETQDM* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01745 711 MobiDBLite consensus disorder prediction 688 711 - -
Rops4g01745 711 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 24 248 - -
Rops4g01745 711 PRINTS Leucine-rich repeat signature 158 171 - -
Rops4g01745 711 PRINTS Leucine-rich repeat signature 92 105 - -
Rops4g01745 711 Gene3D Phosphorylase Kinase; domain 1 370 482 - -
Rops4g01745 711 SMART LRR_typ_2 89 116 IPR003591 -
Rops4g01745 711 SMART LRR_typ_2 158 182 IPR003591 -
Rops4g01745 711 SMART LRR_typ_2 135 157 IPR003591 -
Rops4g01745 711 MobiDBLite consensus disorder prediction 688 704 - -
Rops4g01745 711 CDD STKc_IRAK 411 680 - -
Rops4g01745 711 Gene3D Ribonuclease Inhibitor 24 244 IPR032675 -
Rops4g01745 711 ProSiteProfiles Protein kinase domain profile. 405 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01745 711 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 682 IPR046959 -
Rops4g01745 711 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Rops4g01745 711 Pfam Protein tyrosine and serine/threonine kinase 407 677 IPR001245 GO:0004672|GO:0006468
Rops4g01745 711 Gene3D Transferase(Phosphotransferase) domain 1 484 698 - -
Rops4g01745 711 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515
Rops4g01745 711 MobiDBLite consensus disorder prediction 253 274 - -
Rops4g01745 711 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 483 691 - -
Rops4g01745 711 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 369 482 - -
Rops4g01745 711 MobiDBLite consensus disorder prediction 231 277 - -
Rops4g01745 711 MobiDBLite consensus disorder prediction 315 336 - -
Rops4g01745 711 SUPERFAMILY L domain-like 23 225 - -
Rops4g01745 711 SUPERFAMILY Protein kinase-like (PK-like) 384 677 IPR011009 -
Rops4g01745 711 ProSitePatterns Protein kinases ATP-binding region signature. 411 434 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01745 Rops-Chr4 41547785 41557341 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01745 8 711 Strubbelig Receptor Gene Family AT1G53730 66.017 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Rops4g01745 PK_Tyr_Ser-Thr 3.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01745 - - gmx:100780323 1134.78