Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01735 ATGGCTTCTGCGTGTGCATCATCTGCCATTGCATCTGTTGCCATTTCTACCCCAAGTTCCCAGAAGAATGGATCACCCTTGGGAACCCCAAAAGCTTTTCTTAGTGGGAGGAAACTAAGGGTTAACAACTTTACACCAGCAGTTGGAGGAAGATCCACCACTACAGTGTGTGCAGTAGCTGACCCTGATAGGCCTCTATGGTTCCCAGGCAGCACCCCTCCACCATGGCTTGATGGAAGTCTCCCAGGAGATTTTGGGTTTGATCCTCTAGGTCTTGGATCTGATCCTGAGAGCCTGAGATGGAATGTTCAATCAGAACTTGTGCACTGCAGATGGGCAATGTTGGGTGCTGCTGGCATTTTCATCCCAGAATTCCTTACAAAGATTGGTATCTTAAACACCCCTTCATGGTACACTGCTGGGGAACAAGAATACTTCACAGACACTACCACCCTTTTCATAGTTGAGCTCATTTTCATTGGCTGGGCTGAGGGTAGAAGGTGGGCTGACATAATCAAGCCAGGTTGTGTGAACACTGACCCTATCTTCCCCAACAACAAGCTCACAGGAACTGATGTTGGGTACCCTGGTGGGCTTTGGTTTGATCCACTTGGCTGGGGAAGTGGTTCTCCTGAAAAGATCAAGGAGTTGAGAACAAAGGAGATCAAGAATGGGAGATTGGCTATGTTGGCTGTGATAGGGGCATGGTTCCAGCACATATACACTGGCACTGGTCCTATTGACAACCTCTTTGCTCATCTTGCAGATCCTGGCCATGCTACTGTTTTTGCTGCTTTCACTCCCAAGTAA 810 0.4827 MASACASSAIASVAISTPSSQKNGSPLGTPKAFLSGRKLRVNNFTPAVGGRSTTTVCAVADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQSELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVIGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01735 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 46 267 IPR001344 GO:0009765|GO:0016020
Rops4g01735 269 FunFam Chlorophyll a-b binding protein, chloroplastic 74 259 - -
Rops4g01735 269 Gene3D Chlorophyll a/b binding protein domain 74 259 - -
Rops4g01735 269 Pfam Chlorophyll A-B binding protein 73 239 IPR022796 -
Rops4g01735 269 SUPERFAMILY Chlorophyll a-b binding protein 59 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01735 Rops-Chr4 41422823 41424584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01735 45 269 Chloroplast and Mitochondria Gene Families AT3G61470 87.556 5.44e-149 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01735 K08908 - gmx:100802138 518.464