Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01715 ATGTTTCCTGTTGTTGTTCTTTTGACATCTTTTGTTACTCTTAGTTTTGGACTTCTTGTGTTCCTGCCATTTACATGTTCCCTCCAAATGCAAGAAAAACTACTAGAACCCCCTTTGGTTCCAAATTCTTGCAATGAAACATGTGGGAAACTCCATGTTCCTTTTCCATTCTATGTTAACAGATCTTGTGTGTCAATATCTAGTGCTTTCCACCTCTCTTGCTCAAATTCCTCTACCCTTTTGCTCAAAATTGGCTCAGACAGTTATCCAGTGTTGGAATTCTTCTCAGATGGTTTGTTAGTGGGATATCCAGGCACATCATCATGTCGCCAGTACAATGATTTGAATTCATTTGGTGAAAGTTTTGCAGGAAAGGACTACTTTGGAGTCTCAGTTGACAATGTTATTGGCCTCTATGACTGTGAGGATTCTTCCCTTTGCAAAGCTGATTGTGAAACAATTGACCTTCCTGGTTGTGATGGAAATAGTGGTGGCTCCCTTGGTTGCTGCTATCCACTTTCTGACCATAGTATATGGCATATTGGTAAAGGCTTTTCGGTGTTTTCTCAGTTTGGATGCAGGGGATTTTCTAGTTGGGCTGTTTTGAGAGGGTCATATTCAGGAAAACGTGGGGTCAAATTGGAATGGGCTATTCCAAGGAACTCCTCCAAGGAAATTTGTGCAAGGAATGCAAACATGGCAAATGCTACATCAATTGAAGGTGGTGTAAGGTGTGTTTGTCAAGATGGATATGTTGGTAACGGGTTTGCTAATGGAACAGGATGCTTGCAGTCCTGTGTCAAGGACGGACAGGAAGCATATGGAAGTGACTGCTACATCAAAAGACATGATCAAAGGAAAATGGTTATCATTGCCGGAGTTCTTGGTCCAGTTCTTATTGTTTCCTCCTTGGTTGCACTATTTTATCTTCTTAAAAGACCAGAGAAACCAGGAATGTTCGATGCTGAGCAGGCTTATTATCACAACATTTCATTCCGTAAAGCTTGTAGAACTCGACTATTCAGCCACCGTGAGCTAGAGGAAGCCACCAATGGTTTTGAAGAGGGTAAGAAACTCATGCATGGCAGTAATGGTACAATGTTTGCTGGTGTTATTGGAGATGGATCTCATGTAGCTGTGCACAAGTTCAAATGTGAGAATGAGAAAGACATTCTCCAAGTCCTTTCACAAATTGAGGTTCTATCTGCCATTGTGCATAGGAATGTGGCATGCCTTCTTGGGTGTTGTATTGATTCTGGCTACACCCCTCTAGTGGTTTATGAGTATCCAGCAAATGGTACCTTGAAGGAACATTTAAGCCAAAGCAAGGGACAAATTTTAGATTGGTACAGGAGATTGACTATAGCAGCAGAAACAGCTAGTACTATTGCATTTTTACATTATGAGAACTCTCCTCCCATATTTCACCATAACCTTAAGTCTAGCTGCATCTTCCTAGATGATGATTTTTCTGTCAAGATTGCAGGATTTGGGCTACTTAGTTCTGATTTTAATTATGATTCTCACTTGTACAAGAATCATGAATGCTTGAAATTCTGCAAAAATGATGTCTATGACATGGGGGTGGTGCTTCTTGATATTATCTCAGGCTCAAATCACTTGGAGTCTCCTACTTTAGCCTTGCAGAAAATAAGGAATGGAAAGCTAGAAGAAATTGTTGATCCACTTCTTTACTATCATGAACAACCACATCATCGCCAAGAGCAAATACAAATAGTAGCAGACCTTGCAACAAGATGCTTGCTATTTGGTGCAGATGGAAAGCTAGGAATGATTGATGTTGTAAGAGAGTTGGCACACTTAACAAAAGAGAGTCTTGATGGAGGAACTACAAGGGGGCTTGCACTAGAGGAGACATTCTCAAATTCAAGCCTTCTTCAAATGATATCAATGTCTCCTGATTCTATGAACGTTCCATGA 1941 0.406 MFPVVVLLTSFVTLSFGLLVFLPFTCSLQMQEKLLEPPLVPNSCNETCGKLHVPFPFYVNRSCVSISSAFHLSCSNSSTLLLKIGSDSYPVLEFFSDGLLVGYPGTSSCRQYNDLNSFGESFAGKDYFGVSVDNVIGLYDCEDSSLCKADCETIDLPGCDGNSGGSLGCCYPLSDHSIWHIGKGFSVFSQFGCRGFSSWAVLRGSYSGKRGVKLEWAIPRNSSKEICARNANMANATSIEGGVRCVCQDGYVGNGFANGTGCLQSCVKDGQEAYGSDCYIKRHDQRKMVIIAGVLGPVLIVSSLVALFYLLKRPEKPGMFDAEQAYYHNISFRKACRTRLFSHRELEEATNGFEEGKKLMHGSNGTMFAGVIGDGSHVAVHKFKCENEKDILQVLSQIEVLSAIVHRNVACLLGCCIDSGYTPLVVYEYPANGTLKEHLSQSKGQILDWYRRLTIAAETASTIAFLHYENSPPIFHHNLKSSCIFLDDDFSVKIAGFGLLSSDFNYDSHLYKNHECLKFCKNDVYDMGVVLLDIISGSNHLESPTLALQKIRNGKLEEIVDPLLYYHEQPHHRQEQIQIVADLATRCLLFGADGKLGMIDVVRELAHLTKESLDGGTTRGLALEETFSNSSLLQMISMSPDSMNVP* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01715 646 ProSiteProfiles Protein kinase domain profile. 353 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01715 646 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 40 609 IPR045274 GO:0007166
Rops4g01715 646 Gene3D Transferase(Phosphotransferase) domain 1 431 617 - -
Rops4g01715 646 Pfam Protein tyrosine and serine/threonine kinase 355 513 IPR001245 GO:0004672|GO:0006468
Rops4g01715 646 Gene3D Phosphorylase Kinase; domain 1 324 429 - -
Rops4g01715 646 FunFam probably inactive receptor-like protein kinase At2g46850 325 429 - -
Rops4g01715 646 Pfam Wall-associated receptor kinase galacturonan-binding 44 94 IPR025287 GO:0030247
Rops4g01715 646 FunFam Putative WAK-related receptor-like protein kinase family protein 431 618 - -
Rops4g01715 646 SUPERFAMILY Protein kinase-like (PK-like) 336 605 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01715 Rops-Chr4 41195424 41198379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01715 44 608 Receptor kinase-like Gene Family AT2G23450 29.868 9.29e-66 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Rops4g01715 PK_Tyr_Ser-Thr 9.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01715 - - gmx:100810557 1015.76