Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01714 ATGATGGATCCCACTATGACCCGTTTGGTCGGGGATTACATACTGGGTTCTCGAATCGGGTCGGGTTCATTCGCCGTGGTGTGGCGTTCACGGCACCGGCACTCGGGTCTGGAGTTTGCAGTGAAGGAGATTGATAAGACTCAGTTGAGTCCCAAAGTGAGAGAGAATCTTATGAAAGAGATTTCTATACTAAGCACAATTGATCACCCTAACATCATTCGACTCTTCGAAGCAATTCAGACCCATGATAGGATTTACCTTGTTTTGGAGTATTGTGGTGGTGGGGACCTTGCTGCTTATATCCATCGCCATGGTAGAGTTTCTGAATCCATTGCTCGCCATTTCATGAGGCAATTGGCTGCCGGGTTGCAGGTGCTTCAAGAAAAGAACCTCATACATAGAGATTTAAAACCACAGAACTTACTGTTGGCAACTACTGCAGCTACACCAATTATGAAAATAGGGGATTTTGGTTTTGCCAGGTCTCTCACACCTCAGCAGTTGGCAGATACACTATGTGGTTCACCTTATTACATGGCCCCAGAGATAATTGAAAGTCAAAAGTATGATGCCAAGGCTGATTTATGGAGTGTTGGGGCAATATTGTATCAGCTAGTGATTGGGAGGCCGCCATTTGATGGAAATAGTCAATTGCAGCTTTTTCAAAATATTTTGGCATCTACTGAACTGCACTTTCCGCCGGAGGCTTTAAAAGAGCTACATTCTGATTGCTTGGATCTTTGTAGAAGCCTTTTACGTCGAAACCCAGATGAGAGATTAACATTTGAGGCGTTCTTCAATCACAATTTCCTACGGGAACCCAGGTCCAGTGTGAATATTGAGCAGTTTCAGTTACATCAATCAGAACAATCAATGGTTCATCAATTAGTTGGCTCTGCCTCTGAGAAGATGTCTCAATCACATTCTGAGTATCATGTTGAGTCATTTGTAGATGATCCAGTGGGAGTCAGTTCAGCTGTCAATGAGACCATGCTTTTGCAAAGAAAGGATGGTAAGATTACAGCTGGCATTAAGAGTATAAAAGGGTCAACTCCAACTAGTGCAAGTGATAAGCTGGGGAAATCTGTTGGTGCTGGTACTCATTTGGCAAACCAACCTCGAGTTTCCCATTTGATGGAGTCCATTGAGAAAGATTATGTCCTCATCAATTCTCATTTTGCATCATTGGAGGCTTTCTCTGACTACTTTGAGGCATCTGTGCAAGATAATTCCTCAAACAGGTTTTCTATCTGTCCTTCAAAGAGGACTAACCTGGAAATCAGAGTTGCAAAGCAAACAAAGGATCTGTCCTCTTCCTCAGCTGACAGGCTAGAAAATTTAAAAAGCAATGAACTTGAGGCATCAGTGCCATCCTGTGAATTAGCTGCCTCAAGGAAAGAGCAGGGAATTTCCTCTCTGCACCCTTCAAACAGGTTAGAGTTTTTGCATCAGTATGCGCAGGTCCTTGGAGAACTTTCGCAAGAAAAGTATAATGCAGGACTGTATCTAGAGGCTCTTGCAGTTGAGTTGGTGGTTCTGGCTATATGGAAGAAAGCTCTAGATATTTGTAGCTCTTGGATAGCCTCCATTACTGAGGGTGAGTTGCCTGGAAGCAGTTCAGCTAATGAATCCATATTTGCCCCCGGAGACGTGGGCTTATCACAGACTAGAGAACAGAAAATAAATTTTAGTGATCCTGCATCTGTCTCCTTATGGGCCAAACATGGGTTTGTTGCTGCAGTAGAACGTGCTGAGAAACCATCATGTCATATTCAAAACATGGATGGGGCAACTGAGATGCCAGATGCAATGGAGATTATATTCCAAGAAGCACTTCTTGTTGGGAAAAGTGGCACCGTAGATGAGTATAAGAAGAACAGAGATAGGGCTGCTGCATCTTACTCAAAAGCAATGGTTCTACTTTCATTTATTGTGGAAGAAGCAGAGAACCTTCCACTGAATCCACCATTTTCACTTTTTGCTGCTAACAAGAAGAGAATCTTACAATATATTCGCAACTTGCAGTTTCGTAAAAGATCTTCAACAGAGTCCTCTTCAAAGGAAGTCCATACTCTTCCGTCAAAGTAA 2088 0.4296 MMDPTMTRLVGDYILGSRIGSGSFAVVWRSRHRHSGLEFAVKEIDKTQLSPKVRENLMKEISILSTIDHPNIIRLFEAIQTHDRIYLVLEYCGGGDLAAYIHRHGRVSESIARHFMRQLAAGLQVLQEKNLIHRDLKPQNLLLATTAATPIMKIGDFGFARSLTPQQLADTLCGSPYYMAPEIIESQKYDAKADLWSVGAILYQLVIGRPPFDGNSQLQLFQNILASTELHFPPEALKELHSDCLDLCRSLLRRNPDERLTFEAFFNHNFLREPRSSVNIEQFQLHQSEQSMVHQLVGSASEKMSQSHSEYHVESFVDDPVGVSSAVNETMLLQRKDGKITAGIKSIKGSTPTSASDKLGKSVGAGTHLANQPRVSHLMESIEKDYVLINSHFASLEAFSDYFEASVQDNSSNRFSICPSKRTNLEIRVAKQTKDLSSSSADRLENLKSNELEASVPSCELAASRKEQGISSLHPSNRLEFLHQYAQVLGELSQEKYNAGLYLEALAVELVVLAIWKKALDICSSWIASITEGELPGSSSANESIFAPGDVGLSQTREQKINFSDPASVSLWAKHGFVAAVERAEKPSCHIQNMDGATEMPDAMEIIFQEALLVGKSGTVDEYKKNRDRAAASYSKAMVLLSFIVEEAENLPLNPPFSLFAANKKRILQYIRNLQFRKRSSTESSSKEVHTLPSK* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01714 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Rops4g01714 695 Gene3D Transferase(Phosphotransferase) domain 1 4 341 - -
Rops4g01714 695 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 8 554 IPR045269 GO:0004674|GO:0006914
Rops4g01714 695 FunFam Serine/threonine-protein kinase ATG1 5 314 - -
Rops4g01714 695 CDD STKc_ATG1_ULK_like 19 270 - -
Rops4g01714 695 ProSiteProfiles Protein kinase domain profile. 13 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01714 695 Pfam Protein kinase domain 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01714 695 SMART serkin_6 13 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01714 695 SUPERFAMILY Protein kinase-like (PK-like) 9 310 IPR011009 -
Rops4g01714 695 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Rops4g01714 695 FunFam Non-specific serine/threonine protein kinase 2 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01714 Rops-Chr4 41169983 41175498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01714 9 289 CBL-interacting serine-threonine protein kinases AT2G30360 34.375 5.71e-50 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Rops4g01714 Pkinase 2.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01714 - K08269 gmx:100779262 1058.13