Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01707 ATGGCTCCTGTGGCCAAATACTTTGCTCGCAATGGTGGTGGTGGGTCTCCAGGGCCTTTGATGGTTTTGAATCAGGACAAGACCATCCTTCACAGTTGGTACCAACTGAAAGGTTCAATTTTGGAAGGAGGTACTCCATTCAACAGGCTCCACGGCAAAGAAGTCTTTGAGTATTCCAATTTGAACTCAAGCTTCAATAAGCTTTTCATGGAAGCGATGAGCAATCGTGCCACTTTAATCATGAAGAAGATTCTTGAATTCTATGATGGGTTTGAGCACATAAGTAGGCTGGTGGACGTTGGAGGTGTTGAACACATGGGAGGAGATATGTTTGAAAGCGTACCAGAAGGAGATGCCATTTTGATGAAGGTGTTGAAAAACTGTTATGTTGCTATTCCTAATGGCGGTAAGGCGATTGTTGTGGAAGGAGTTCTTCCATTTGAACCTGCAACTACAGATAAAGTGAAGAACATTTCCCTATTTGATGTTCTCATGATGACTACATGCCTAGGAGGGAAGGAGAGAAGTGAACAAGAAATCATGGCATTGGCAAAAGAAGCTGGATTTAGTGACATTAGATTTGCATGCTTTGTTTGTGGTCTTTGGGTTATGGAATTCATCAAGTAG 627 0.4242 MAPVAKYFARNGGGGSPGPLMVLNQDKTILHSWYQLKGSILEGGTPFNRLHGKEVFEYSNLNSSFNKLFMEAMSNRATLIMKKILEFYDGFEHISRLVDVGGVEHMGGDMFESVPEGDAILMKVLKNCYVAIPNGGKAIVVEGVLPFEPATTDKVKNISLFDVLMMTTCLGGKERSEQEIMALAKEAGFSDIRFACFVCGLWVMEFIK* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01707 208 Gene3D Vaccinia Virus protein VP39 103 197 IPR029063 -
Rops4g01707 208 Gene3D Vaccinia Virus protein VP39 10 102 IPR029063 -
Rops4g01707 208 Pfam O-methyltransferase domain 33 102 IPR001077 GO:0008171
Rops4g01707 208 Pfam O-methyltransferase domain 103 190 IPR001077 GO:0008171
Rops4g01707 208 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 15 206 IPR029063 -
Rops4g01707 208 PANTHER O-METHYLTRANSFERASE 103 189 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01707 Rops-Chr4 41024500 41031923 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01707 1 208 Monolignol Biosynthesis Gene Families AT5G54160 39.844 3.29e-59 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01707 K13066 - gmx:100788873 293.893