Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01701 ATGGAAGCACAAAGCTCTCAGCATTCGCAAGTTATTGAGATCAGTGGAGATCTTCCTGATTCAGGAAGAAAGATTTGTGGGGAAGCACCATGTGGGTTCGCTGATGCTGGATCCATCTCTAAGGATTCTGAAGAACGATCAGCTTCCATGCGAAAGCTTTTGATAGCAGTGGTCCTCTGTGTTATATTTATGACCGTTGAAGTAATTGGTGGCATCAAAGCTAACAGTCTTGCAATATTGACTGATGCAGCACATTTGCTTTCAGATGTTGCAGCATTTGCCATCTCCTTATTCTCTTTATGGGCCGCGGGATGGGAAGCTAATCCTCGTCAGTCATATGGATTTTTTCGGATAGAGATTCTTGGTGCTTTGGTTTCTATACAATTGATATGGCTGCTTACTGGGATTCTGGTATACGAAGCCATTGCTAGAATGATTTCCAGTCCTCAAAATGTGGATGGTAGATTAATGTTTATAGTTGCTGCATTTGGTCTTGTGGTTAACATCATAATGGCTTTGTTATTAGGTCATGATCATGGACACGGACATGGGCATGGGCATGGACATGGACACGGACATGATGATCATGGCCACGGACATGGACACGGACATGATGATCATGGCCACGGACATGGATTTTCAGTGTCTACCCATCATGATAAACATGCAAAAGATGAGCACCATCACACTCATGATGTTCACACACACCATCATGATGAAAAGCATCCAAAAGATGCGCATCATCATGCACATGAAGATCACATGCACCCTGATGCCCACAAAGAGGTTACTGAACCACTTCTTGATGAATCAAAAGGCAGATCCGAGCAGAGGAAACAGCGGAACATTAATGTACAGGGTGCTTATCTCCATGTACTTGGGGACTCTATCCAGAGTGTTGGGGTGATGATTGGGGGAGCAATCATATGGTATAACCATGAGTGGCAAATAATTGATTTAATTTGCACTCTAATCTTTTCTGTAATTGTTTTGGGGACAACTATCAATATGCTGCGAAACATTTTGGAAGTCCTGATGGAGAGCACACCACGTGAGATAGATGCTACTGAGCTTGAAAGGGGGCTGTTGAAGATGGAAGAAGTAGTGGCTGTTCATGAACTGCACATATGGGCCATTACAGTGGGGAAGGTTCTGCTAGCTTGTCATGTTAAAATCAAACGTGATGCAGATGCAGACATGGTGCTGGACAAGGTAATAGACTACATCAAGAGGGTTTATAACATCAGTCATGTAACTATACAGATAGAGCGCTAG 1275 0.4329 MEAQSSQHSQVIEISGDLPDSGRKICGEAPCGFADAGSISKDSEERSASMRKLLIAVVLCVIFMTVEVIGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEANPRQSYGFFRIEILGALVSIQLIWLLTGILVYEAIARMISSPQNVDGRLMFIVAAFGLVVNIIMALLLGHDHGHGHGHGHGHGHGHDDHGHGHGHGHDDHGHGHGFSVSTHHDKHAKDEHHHTHDVHTHHHDEKHPKDAHHHAHEDHMHPDAHKEVTEPLLDESKGRSEQRKQRNINVQGAYLHVLGDSIQSVGVMIGGAIIWYNHEWQIIDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDATELERGLLKMEEVVAVHELHIWAITVGKVLLACHVKIKRDADADMVLDKVIDYIKRVYNISHVTIQIER* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01701 424 Gene3D Cation efflux protein transmembrane domain 49 345 IPR027469 -
Rops4g01701 424 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 6 424 - -
Rops4g01701 424 NCBIfam cation diffusion facilitator family transporter 50 424 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Rops4g01701 424 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 347 IPR027469 -
Rops4g01701 424 MobiDBLite consensus disorder prediction 181 259 - -
Rops4g01701 424 Pfam Cation efflux family 53 346 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Rops4g01701 424 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 352 423 IPR036837 -
Rops4g01701 424 MobiDBLite consensus disorder prediction 188 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01701 Rops-Chr4 40900343 40905245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01701 20 424 Inorganic Solute Cotransporters AT3G61940 57.494 1.01e-144 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01701 K14689 - gmx:100794876 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01701 4 40900343 40905245 Rops4g01701 4 40900343 40905245 ECH