Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01689 ATGGACTTATCAGCCATGCCCAAAGCATTTTCTTCCCAACATAGTTGGTATCTATCCACTCTTTCATCTACATTGGACAATTCTAAAGCTACCACCAATGGTCTGAACTCTATTTCCTCTAAGCTGATTTATTCATACACCAATGTCATGAATGGTTTCAGTGCAAATTTGTCACCAGCAGAGCTTGAAGCTCTAAAAAGCTCTCCTGGTTACATTTCATCTGTTCTTGATTTACCTGTGAAGCTTGACACAACACACTCACCACAGTTCCTTGGTCTCAATCCCTACAAAGGGGCATGGCCTGCTTCTGAGTTTGGCAAAGACACCATTGTTGGTTTGGTGGACACCGGCATTTGGCCAGAAAGTAAAAGCTTCAAAGATGATGGGATGACTCAAATTCCTTCAAGATGGAAAGGCCAATGTGAAAATAGCATCCATTTTAAGTCATCTCTATGCAACAAGAAACTCATTGGAGCTCGGTTCTTTAACAAAGGATTGCTGACCAAATACCCCAACATCACCATAGCTTTGAACTCTACCCGTGACTTTGATGGTCATGGGACTCACACATCAACCACAGCAGCTGGGAGCCAAGTTGAAGGTGCATCCATTTTTGGTTATGCTGCTGGATCAGCAACAGGAATAGCTTCACGGGCCAGGGTAGCCATGTATAAGGCCCTCTGGGACGAAGGAGCCTACACATCTGATATAATAGCTGCAATTGATAGTGCAATATCAGATGGTGTAGATGTTCTTTCATTATCATTTGGCTTTGATGATGTACCCTTGTATGAAGATCCTATTGCTATAGCCACGTTTGCAGCCATGGAAAAAGGTATTTTTGTGTCTACATCAGCAGGGAACAATGGGCCCTCATCTAAAACTCTGCATAATGGAACACCATGGACGATAACCGTGGCTGCTGGCACTTTGGATCGAGAATTTCACGGGACTCTTACACTTGGCAATGGAATCCCAATCACTGGTTTGTCACTCTATGTAGGAAACTTCTCTGCCCACCATGTTCCAATTGTTTACATGGGCTTGTGTGACAAGGTGAAGGAACTGGTCAAAGTGAAGAACAAGATTGTGGTGTGTGAAGACAAGAATAGAACCCTTCCAGATCAAATGTCTAATGTGGAGAAAGCAAAAGTTGTAGCGGCTGTGTTCATATCAAACAACTATGACGATTCATTCTTAACCTATAGCTTTGCAAACATCGCAATTAACCCAATAAATGGAGAAATTGTCAAAGCTTACATAAAGAGTAACTCTGATTCAAAAGCAAGCATGTCTTTTAAGATGACAGTGTTTGGTACTAAACCAGCACCAAGTGTGGATAGTTACAGTTCAAGAGGGCCATCAAATAGTTGTCCATTTGTGTTGAAACCAGACATCACTGCTCCAGGTACATCAATCTTAGCTGCATGGCCTTCAAATATTTCAGTGGATGAGTATGGTGTTGATAAACTCTTCAGCAACTTCAATTTGTTAAGCGGCACATCCATGGCATGCCCTCATGTTGCTGGTGTGGCAGCACTTTTGAAAGGAGCACATTCTAATTGGAGCCCTGCATCTATTAGGTCAGCAATTATGACAACATCAGACATATTGGACAATACCATGGGACCCATCAAAGACATCGGCAAAGATTATAAACCAGCCTCTCCTTTAGCCTTGGGAGCTGGTCATATAAACCCCAACAAAGCCCTTGACCCTGGACTTGTTTATGATGTGGGAGTTCAAGATTATGTGAATCTTCTCTGTGCACTAAACTTCACCCAAAAGAACATCACTACCATTACTAGATCCTCTTCCAATGATTGCACCAACCCTTCCTTGGATCTCAACTACCCTTCTTTCATTGCTTTCTTCAATGCTAACTATCCTTCTTCTTCCACAACAGCACATGAATTTCAGAGAACCGTGACTAATGTTGGGGAGGGACAGGCAATTTATGTTGCTAGTGTTACTCCTATAAAAGGGTTCAATCTCAGTGTCATCCCTAACAAGTTGGTGTTCAAGGAGAAGAACCAGAAGCTAAGTTACAAGTTGAGGATCGAAGGTCCAAGAATGACAAAAATGAAAAAAGTAGCTTTTGGATACCTCAGTTGGACAGACGTGAAGCATGTTGTCAGGAGTCCTATTGTGGTCACCACTATCAAATTCTAA 2172 0.4222 MDLSAMPKAFSSQHSWYLSTLSSTLDNSKATTNGLNSISSKLIYSYTNVMNGFSANLSPAELEALKSSPGYISSVLDLPVKLDTTHSPQFLGLNPYKGAWPASEFGKDTIVGLVDTGIWPESKSFKDDGMTQIPSRWKGQCENSIHFKSSLCNKKLIGARFFNKGLLTKYPNITIALNSTRDFDGHGTHTSTTAAGSQVEGASIFGYAAGSATGIASRARVAMYKALWDEGAYTSDIIAAIDSAISDGVDVLSLSFGFDDVPLYEDPIAIATFAAMEKGIFVSTSAGNNGPSSKTLHNGTPWTITVAAGTLDREFHGTLTLGNGIPITGLSLYVGNFSAHHVPIVYMGLCDKVKELVKVKNKIVVCEDKNRTLPDQMSNVEKAKVVAAVFISNNYDDSFLTYSFANIAINPINGEIVKAYIKSNSDSKASMSFKMTVFGTKPAPSVDSYSSRGPSNSCPFVLKPDITAPGTSILAAWPSNISVDEYGVDKLFSNFNLLSGTSMACPHVAGVAALLKGAHSNWSPASIRSAIMTTSDILDNTMGPIKDIGKDYKPASPLALGAGHINPNKALDPGLVYDVGVQDYVNLLCALNFTQKNITTITRSSSNDCTNPSLDLNYPSFIAFFNANYPSSSTTAHEFQRTVTNVGEGQAIYVASVTPIKGFNLSVIPNKLVFKEKNQKLSYKLRIEGPRMTKMKKVAFGYLSWTDVKHVVRSPIVVTTIKF* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01689 723 Pfam Subtilase family 106 540 IPR000209 GO:0006508|GO:0008236
Rops4g01689 723 CDD Peptidases_S8_3 80 536 IPR034197 -
Rops4g01689 723 PRINTS Subtilisin serine protease family (S8) signature 182 195 IPR015500 -
Rops4g01689 723 PRINTS Subtilisin serine protease family (S8) signature 499 515 IPR015500 -
Rops4g01689 723 PRINTS Subtilisin serine protease family (S8) signature 106 125 IPR015500 -
Rops4g01689 723 Pfam Fibronectin type-III domain 615 718 IPR041469 -
Rops4g01689 723 CDD PA_subtilisin_like 318 430 - -
Rops4g01689 723 Gene3D Peptidase S8/S53 domain 108 584 IPR036852 GO:0004252|GO:0006508
Rops4g01689 723 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 82 IPR037045 -
Rops4g01689 723 Pfam Peptidase inhibitor I9 6 82 IPR010259 -
Rops4g01689 723 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 718 IPR045051 -
Rops4g01689 723 ProSitePatterns Serine proteases, subtilase family, serine active site. 500 510 IPR023828 -
Rops4g01689 723 Gene3D - 588 721 - -
Rops4g01689 723 SUPERFAMILY Subtilisin-like 82 575 IPR036852 GO:0004252|GO:0006508
Rops4g01689 723 Gene3D - 312 438 - -
Rops4g01689 723 ProSiteProfiles Serine proteases, subtilase domain profile. 90 571 - -
Rops4g01689 723 FunFam Subtilisin-like protease SBT1.5 108 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01689 Rops-Chr4 40813330 40815649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01689 1 707 Subtilisin-like Serine Gene Family AT5G67090 46.961 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01689 - - gmx:100786751 1083.17