Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01674 ATGTTGGAAAGTGGAGAAAATAATAACTTGAAGGAAGTTCCAATCACAAATCATCACTGCCACCACAACCACCACCAGAGAAGGAAGGTGGTGAATACTAAAGATATACCAAAAGGTTTTTTGCCAATCAAAGTGGGGCAAGGTGAGGAGCAAAAGAAAATTGTGGTGCCTGTGATGTACCTCAACCATCCACTGTTTTCGCAGCTGCTGAAGGAGGCAGAGGAAGAATATGGTTTTGATCAACAAGGAACCATAATTATCCCTTGTCGTGTGGAGGAGTTTAGGTACGTTCAAGACCTCATTGATAGGGAAAAATCCCCACAACACCACCACCACCACCACCATGTCATTAGTTGTTTCAGGGCTTCACGTCAAGAACATCACATATAA 390 0.4308 MLESGENNNLKEVPITNHHCHHNHHQRRKVVNTKDIPKGFLPIKVGQGEEQKKIVVPVMYLNHPLFSQLLKEAEEEYGFDQQGTIIIPCRVEEFRYVQDLIDREKSPQHHHHHHHVISCFRASRQEHHI* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01674 129 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 96 IPR003676 GO:0009733
Rops4g01674 129 Pfam Auxin responsive protein 30 100 IPR003676 GO:0009733
Rops4g01674 129 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01674 Rops-Chr4 40416302 40416691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01674 35 102 Calmodulin-binding Proteins AT3G43120 47.059 7.91e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01674 K14488 - gmx:100808516 178.718