Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01667 ATGATTCCCTACAACCCCATAATCCTCGTTTCCTTCATCGTCGTCGTTTGTTTTATAATTCGGTTGTTGCTGTTCAAAACGGGATTGATATACACCATGAAGAAAATCCAGAGAAGTGTCCAAGATTGGTTCCACGTGTACCAGTTCCTCAAAGTCCCCGAATTAAACGAAAGCAAGCAGAGGAATCTGCTATACCGCAAGGTCTCTCTCTATTTACATTCTCTTCCTTCCATTGAAGACTCTGACTTCACGAACCTCGTTACCGGGAACAACCAAAACGACATCGTTTTATGCCTCGACGCCAACCAAACCATCGAGGACCGGTTTCTTGGAGCCACGCTCTTCTGGTTTAACCAAAAAACTGAACCGGACCGGACCGGTGGCGCTTTCGTTCTGAAGATAAGAAAAGCCGATAAACGGCGAATTCTCCGGCCTTATCTCCGTCACATCCACGCCGTCGCCGAAGAGATTGAAAACACAAAAAAAGGCGATTTGCGGCTGTTCATCAATGTCGGCGGCGGCGGCCACGGCGGAGGAACGCGGTGGAGATCCATTCCGTTTAATCATCCTTCGACGTTTGAAACCATGACAATGGAATCGGCTCTGAAAAACAAGATCAAATCGGATCTCGAATCGTTTCTCAAGGCGAAGCAGTATTACCGGAAACTCGGCAGAGCGTGGAAACGGAGCTTCCTTTTGTACGGTCCCTCCGGCACAGGAAAATCGAGCTTCGTCGCCGCGATGGCGAATTTTTTATGCTACGATGTCTACGACGTGGATCTCTCCAAGGTTCGTGGCGATTCGGATCTGAAATTCCTCCTCCTCGAAACGACGGCGAAATCGATCATCGTCGTGGAGGATCTCGATCGGTTTGTAGCGGAGGAATCGCAATCGGCGGCGATTACACCGTCAGGGATCCAGAACTTCATGGACGGAATTCTAAGCTCGTGTTGTGGAGAAGAGAGAGTGATGGTTTTCACAATGAACAGCAAGGATTGTATCGACCCGAATTTGCTTCGTCCTGGTCGGGTCGACGTTCATATCCATTTTCCAGTTTGCGATTTCTCGGCGTTCAAGTCGCTGGCTAATAATTACCTTGGTGTGAAGGAGCACAAGCTTTTCCCTCAGGTGGAGGAGATTTTCCGGCAAGGAGCGAGTCTCAGCCCCTCCGAGATCGGCGAGTTGATGATCGCGAATCGGAACTCACCGAGTCGGGCCATAAAATCGGTTATCGGGGCGTTACAAACGGACGGTGATGGGAGGGGTTTAGGGGATACGATCGTACGGCAGACAGGGGATGATGACATGGATGAAGCCCACGATGAGTTGTGTGGTGGTGAGAGTTTCTCTCCGGTTAAGGATTTGCGGAAACTGTACGGTTTGTTCAAATTGCGGAAAGGGAACAAAAGATCTCAGTCGGGTAATTTCTCGGTCAACGATAGATGA 1446 0.4959 MIPYNPIILVSFIVVVCFIIRLLLFKTGLIYTMKKIQRSVQDWFHVYQFLKVPELNESKQRNLLYRKVSLYLHSLPSIEDSDFTNLVTGNNQNDIVLCLDANQTIEDRFLGATLFWFNQKTEPDRTGGAFVLKIRKADKRRILRPYLRHIHAVAEEIENTKKGDLRLFINVGGGGHGGGTRWRSIPFNHPSTFETMTMESALKNKIKSDLESFLKAKQYYRKLGRAWKRSFLLYGPSGTGKSSFVAAMANFLCYDVYDVDLSKVRGDSDLKFLLLETTAKSIIVVEDLDRFVAEESQSAAITPSGIQNFMDGILSSCCGEERVMVFTMNSKDCIDPNLLRPGRVDVHIHFPVCDFSAFKSLANNYLGVKEHKLFPQVEEIFRQGASLSPSEIGELMIANRNSPSRAIKSVIGALQTDGDGRGLGDTIVRQTGDDDMDEAHDELCGGESFSPVKDLRKLYGLFKLRKGNKRSQSGNFSVNDR* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01667 481 Pfam Domain associated at C-terminal with AAA 34 117 IPR025753 -
Rops4g01667 481 Pfam ATPase family associated with various cellular activities (AAA) 232 351 IPR003959 GO:0005524|GO:0016887
Rops4g01667 481 PANTHER BCS1 AAA-TYPE ATPASE 45 415 - -
Rops4g01667 481 SMART AAA_5 227 354 IPR003593 GO:0016887
Rops4g01667 481 Gene3D - 184 352 IPR027417 -
Rops4g01667 481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 409 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01667 Rops-Chr4 40175167 40177238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01667 223 352 Calmodulin-binding Proteins AT3G56690 28.966 7.00e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01667 - K08900 gmx:100787809 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01667 4 40175167 40177238 Rops4g01667 4 40175167 40177238 ECH