Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01662 ATGGAAGAAAAGCCATTCCCTGCATGGTCATGGTCTGTGGAACAGTGTTTGAAAGAGTATGAAGTGAAACTGGACAAGGGTCTAAGTAGTTTTGAGGTTCAGAAGAGGCGTGAGAAATATGGATGGAACGAGTTAGCAAAAGAGAAAGGGAAGCCCTTGTGGGAATTAGTATTAGAACAATTTGATGACATGCTGGTGAAGATACTTTTGGTTGCAGCCTTCATATCATTTCTTTTGGCTTACTTTCAAGGAAGTGAATCAGGTGAGTCTGGATTTGAAGCTTATGTGGAGCCACTTGTGATCATTTTGATTTTAGTCCTTAATGCCATTGTTGGAGTTTGGCAAGAGAATAATGCTGAAAAGGCTCTTGAAGCTCTCAAAGAGTTGCAATGTGAATCTGGAAAAGTGTTAAGGGATGGATATTTTGTGCCTGATTTGCCTGCAAGAGAGCTTGTTCCTGGTGACATTCTGGAGTTGCATGTTGGAGATAAAGTCCCTGCTGATATGAGAGTTGCAGCATTGAAAACCTCAACATTGAGAGTTGAACAAAGCTCATTAACTGGAGAAGCAATGCCTGTTCTCAAAAGCACCAATCCTATTTTCTTGGAAGATTGTGAATTGCAGGCCAAAGAAAATATGGTTTTTGCAGGCACCACTGTTGTCAATGGAAGCTGTCTTTGTATTGTTATTACAACTGGAATGAACACTGAAATTGGAAAGATACAGAAGCAAATACATGAAGCTTCTCTTGAGGACAGTGATACTCCCTTGAAGAAGAAACTAGATGAGTTTGGTGGCAGGCTTACCACTGCAATTGGGCTAGTTTGCCTTGTTGTATGGGTTATAAACTACAAAAATTTCATTTCTTGGGAAGTTGTGGATGGATGGCCCTCAAACATTCAATTTTCCTTTCAAAAGTGCACATACTATTTCAAAATTGCTGTTGCACTTGCTGTAGCTGCAATCCCAGAAGGTCTCCCAGCTGTTATCACAACTTCTTTGGCACTTGGTACAAGGAAAATGGCTCAAAAGAATGCAATTGTGAGAAAGCTTCCAAGTGTGGAAACTTTGGGATGTACTACTGTGATATGTTCAGATAAAACTGGTACTCTCACAACAAATCAAATGTCTGTGACTGAGTTCTTTACTTTGGGAGGGAAAACCACTGCTTCTAGAGTCATTAGTGTTGAAGGTACAACTTATGATCCTAAAGATGGGGGCATTGTTGATTGGACTTGCTATAACATGGATGCCAACTTGCAAGCCATGGCAGAAGTATGTGCTGTTTGTAATGATGCTGGAGTTTATTTTGATGGTCGCCTATTTAGAGCTACAGGTTTGCCTACTGAAGCTGCTCTCAAAGTTTTGGTTGAAAAGATGGGAGTTCCAGATATGAAGTCAAGGAATAAAATTCGTGATGCACAACTTACTGCAAACAACATGATGGATTGTCCAACTGTGAAGTTAGGCTGTTGTGAGTGGTGGAATAAAAGATCTAAAAGGGTTGCTACATTGGAGTTTGATCGCATTAGGAAGTCAATGAGTGTTATTGTTCGTGAACCAAATGGGGAAAATCGGCTTCTTGTCAAGGGTGCTGTTGAGAGTTTACTGGAGCGTAGTTCACATGTGCAACTTGCTGATGGATCCCTAGTTCCAATAGATGATCAATGTAGGGAATTACTTCTTCAAAGACTCCAGGAAATGAGTTCAAAGGGATTGCGTTGCTTGGGATTGGCATACACTGATGACTTGGGAGAATTTTCAGACTATTATGCAGACACTCATCCTGCTCACAAGAAACTGCTTGATCCAACATACTACTCATCCATTGAAAGTAATCTAGTTTTTGTTGGTGTTGTTGGCATAAGAGATCCTCCTCGTCAGGAAGTTCATAAAGCAATTGAGGATTGTAAGGAAGCTGGTATTAGAATTATGGTGATAACTGGTGATAATAAGTCAACAGCAGAGGCTATTTGTAGGGAAATCAAATTGTTCTCTAGAGATGAGGATCTTACAGGGAAAAGTCTGACAGGTAAGGAATTCATATCTCTTTCTCTTTCAGAACAAGTTAAAATGTTATCAAGACCTGGAGGCAAGGTTTTCTCTAGAGCTGAGCCTAGACACAAGCAAGAAATTGTGAGATTACTGAAGGAAATGGGGGAGATTGTTGCAATGACTGGAGATGGTGTGAATGATGCACCTGCACTTAAACTTGCTGACATAGGGATTGCTATGGGCATAACTGGCACAGAGGTTGCAAAAGAAGCTTCAGATATAGTGCTTGCAGATGACAATTTTAGTACCATTGTTTCAGCTGTTGCTGAGGGTCGCTCTATTTATAATAACATGAAAGCATTTATAAGGTACATGATATCATCAAATGTTGGGGAAGTAATATCCATATTCTTGACTGCTGCTTTGGGGATTCCAGAATGCATGATACCAGTGCAACTTCTGTGGGTGAATTTGGTCACTGATGGTCCACCTGCAACAGCTCTTGGGTTTAACCCTGCTGATGTTGATATTATGCAAAAGCCACCTCGCAAAAGTGATGATCCTCTTATAAGTTCTTGGGTTCTTTTCCGTTATCTAGTAATTGGTTCTTATGTGGGAATTGCAACAGTTGGCATTTTTGTCTTGTGGTACACACAAGCATCTTTTCTTGGCATCAACCTTGTGAGTGATGGCCACACAATTATAGGGTTGTCTCAGCTACGCAACTGGGGGGAGTGTCACTCATGGTCTAATTTCACTGTTGCTCCATTTGAAGTTAGTAGGGGTCGCTTGATCACATTTTCAAATCCTTGTGAATATTTTACAGTTGGGAAAGTAAAAGCCATGACTCTTTCTCTCTCGGTCTTGGTGGCAATTGAGATGTTTAATTCTTTGAATGCACTCTCAGAAGAGAATAGCTTGAGGAAATTACCACCTTGGAGGAATCCTTGGCTTTTGGTAGCCATGTTAGTATCACTAGGACTACATTGTCTCATACTCTACATTCCATTCCTAGCAGAGGTTTTTGGTGTTGCTCCACTAAATTTGACTGAGTGGTTTTTGGTGATTCTAATATCAGCACCTGTTATTCTTATTGATGAGATTCTAAAATTAGTGGTAAGGAGTCAAAGGAAGATGACAAAAGAGAAAGAAGCATGA 3153 0.4037 MEEKPFPAWSWSVEQCLKEYEVKLDKGLSSFEVQKRREKYGWNELAKEKGKPLWELVLEQFDDMLVKILLVAAFISFLLAYFQGSESGESGFEAYVEPLVIILILVLNAIVGVWQENNAEKALEALKELQCESGKVLRDGYFVPDLPARELVPGDILELHVGDKVPADMRVAALKTSTLRVEQSSLTGEAMPVLKSTNPIFLEDCELQAKENMVFAGTTVVNGSCLCIVITTGMNTEIGKIQKQIHEASLEDSDTPLKKKLDEFGGRLTTAIGLVCLVVWVINYKNFISWEVVDGWPSNIQFSFQKCTYYFKIAVALAVAAIPEGLPAVITTSLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGGKTTASRVISVEGTTYDPKDGGIVDWTCYNMDANLQAMAEVCAVCNDAGVYFDGRLFRATGLPTEAALKVLVEKMGVPDMKSRNKIRDAQLTANNMMDCPTVKLGCCEWWNKRSKRVATLEFDRIRKSMSVIVREPNGENRLLVKGAVESLLERSSHVQLADGSLVPIDDQCRELLLQRLQEMSSKGLRCLGLAYTDDLGEFSDYYADTHPAHKKLLDPTYYSSIESNLVFVGVVGIRDPPRQEVHKAIEDCKEAGIRIMVITGDNKSTAEAICREIKLFSRDEDLTGKSLTGKEFISLSLSEQVKMLSRPGGKVFSRAEPRHKQEIVRLLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDIVLADDNFSTIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKSDDPLISSWVLFRYLVIGSYVGIATVGIFVLWYTQASFLGINLVSDGHTIIGLSQLRNWGECHSWSNFTVAPFEVSRGRLITFSNPCEYFTVGKVKAMTLSLSVLVAIEMFNSLNALSEENSLRKLPPWRNPWLLVAMLVSLGLHCLILYIPFLAEVFGVAPLNLTEWFLVILISAPVILIDEILKLVVRSQRKMTKEKEA* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01662 1050 NCBIfam HAD-IC family P-type ATPase 699 811 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops4g01662 1050 NCBIfam HAD-IC family P-type ATPase 301 389 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops4g01662 1050 Pfam Cation transporter/ATPase, N-terminus 9 76 IPR004014 -
Rops4g01662 1050 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 213 381 - -
Rops4g01662 1050 SMART Cation_ATPase_N_a_2 7 81 IPR004014 -
Rops4g01662 1050 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 374 625 - -
Rops4g01662 1050 SUPERFAMILY HAD-like 362 830 IPR036412 -
Rops4g01662 1050 CDD P-type_ATPase_SERCA 9 1039 - -
Rops4g01662 1050 Pfam Cation transporting ATPase, C-terminus 811 1037 IPR006068 -
Rops4g01662 1050 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 790 1045 - -
Rops4g01662 1050 SUPERFAMILY Calcium ATPase, transmembrane domain M 7 1042 IPR023298 -
Rops4g01662 1050 Gene3D - 374 625 IPR023299 GO:0000166
Rops4g01662 1050 PRINTS Sodium/potassium-transporting ATPase signature 357 378 - -
Rops4g01662 1050 PRINTS Sodium/potassium-transporting ATPase signature 979 1003 - -
Rops4g01662 1050 SFLD p-type atpase 345 778 IPR044492 -
Rops4g01662 1050 ProSitePatterns E1-E2 ATPases phosphorylation site. 366 372 IPR018303 -
Rops4g01662 1050 FunFam Calcium-transporting ATPase, putative 111 246 - -
Rops4g01662 1050 PRINTS P-type cation-transporting ATPase superfamily signature 618 629 - -
Rops4g01662 1050 PRINTS P-type cation-transporting ATPase superfamily signature 726 745 - -
Rops4g01662 1050 PRINTS P-type cation-transporting ATPase superfamily signature 750 762 - -
Rops4g01662 1050 PRINTS P-type cation-transporting ATPase superfamily signature 364 378 - -
Rops4g01662 1050 PRINTS P-type cation-transporting ATPase superfamily signature 640 650 - -
Rops4g01662 1050 PRINTS P-type cation-transporting ATPase superfamily signature 182 196 - -
Rops4g01662 1050 PANTHER CALCIUM-TRANSPORTING ATPASE 13 1047 - -
Rops4g01662 1050 SUPERFAMILY Calcium ATPase, transduction domain A 136 244 IPR008250 -
Rops4g01662 1050 Gene3D - 26 248 - -
Rops4g01662 1050 Gene3D - 361 771 IPR023214 -
Rops4g01662 1050 FunFam Calcium-transporting P-type ATPase, putative 619 771 - -
Rops4g01662 1050 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 371 622 IPR023299 GO:0000166
Rops4g01662 1050 Pfam E1-E2 ATPase 130 344 - -
Rops4g01662 1050 Gene3D - 59 1039 - -
Rops4g01662 1050 Pfam haloacid dehalogenase-like hydrolase 361 740 - -
Rops4g01662 1050 SFLD Haloacid Dehalogenase 345 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01662 Rops-Chr4 40111206 40116295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01662 2 1048 Primary Pumps ATPases(2) AT4G00900 78.306 0.0 1699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01662 K01537 - gmx:100792952 1920.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01662 4 40111206 40116295 Rops4g01662 4 40111206 40116295 ECH