Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01658 ATGAATTCTGGTGGTGCTGTGTTAGCTTTGCCTCCAGTGGGCAATGTGTTCAAAACAAGGGAGCCACCTGATTATGAGGAGGACTTTGTGGAGAAAGATCCAACCGGCCGGTACCTAAGGTACAATGAAATCTTGGGCAGGGGTGCCTTCAAGACTGTTTATAGGGGCTTTGATGAGGTTGATGGAATAGAAGTTGCTTGGAACCAAGTTAAGATCGATGGCCTCTTGCACTCAGTAGATGATCTTGCAAAATTGTATTCTGAAGTTCATCTATTGAAGTCTTTGAAACATGAAAATATCATTAAGTTCTATAATTCCTGGATTGATGATAAGCAGAAAACTGTTAACATGATCACTGAACTCTTCACGTCAGGAAATTTAAGGCAATACCGTAAGAAGCATAAATATGTTGAAATGAAAGCCATAAAAGGTTGGGCCAGGCAGATTCTTCAAGGCTTAGTCTACCTTCACAGTCACAAGCCACCTATTATTCACAGAGACTTGAAATGTGACAACATCTTTGTGAATGGAAACCAAGGAGAAGTTAAGATAGGAGACCTTGGTTTGGCAATTGTCATGCAGCAACCAACTGCTCGAAGTGTTATTGGGACCCCTGAGTTTATGGCTCCAGAGCTATATGAAGAGGAATACAATGAACTTGTTGACATCTATTCTTTTGGGATGTGCATATTGGAGATGGTTACTCTTGAGTATCCCTATAGTGAATGCAACAATCCAGCTCAAATCTTTAAGAAAGTTACCTCGGGCATCAAACCTGCTTCCCTTAATAAGGTGAGTGACCCTCAAATTAAAAAGTTTATTGAGAAATGTCTGGTTCCAGCATCTGAGAGATTGTCCGCAGAGGAGCTTTTTAGAGACCCATTTCTACAAGTTGAGAATCCAAAGGATCCAATCCTTTATCCTTTACAGTCAACTGTTAAAACTCCAAGAGCTAGGTCTGGTTCTCCTTCTTTATCCATGGACATAGATGCTGACTACAAACAGCTTTCTATGAGTACCTGTTCTGAAAGCAACCAGGGAAGTCCATATTGTCCTGTTTTTGAAGTCCAAAGGACAAATAAGAACAATGAGTTTAGGTTGAAAGGGACTAAAAATGATGATAACTCGGTATCATTGACCTTGCGTATTGCTGATACATGTGGTCGAGTAAGGAACATACACTTTCTTTTTTACCTTGATACAGATACTGCAGTCTCTGTGGCCTCGGAGATGGTTGAACATTTGGAGCTGGCAGATCATGATGTGGCTTTCATTGCTGAGCTTATTGATTACTTGATAATGAAACTTCTGCCTTGGTGGAAGCCCTCACCTGATCATAACTCAACTAGAGAAGTATGTCTTTGTGGTGGTGGGTCTACAAATGTAGATGGCCAAACCTTAATGGCATGCCCATTGGGTTCTGTCCTAACTAGCATTCCCTCTGAATCAGTTATTGATCAAGATGACTTCTCTGGGCTTTATACAAATCCTAAAGGAGGTGTTGTTACAGCTGGGAAGAGCTGTTTTTTCGAAAATAATGCTGCTTCTGAGGGTTATTATAATAAATCTCCTAGTTTGGTTAACTGGGAAGATCGATATTCGCAAGGATCTGGAGCTTCTGAGATAGTTGTTGAAGATGCTTCTATGAAAAATGACAATTGTCAAGATTCAAATGTTTATGGAAGTTTTAAATGCTTAAGTAGGTCCATCTTTGAACTTGAGCTTGGGGATGCATATTTTGAGGGCTGTAAATTGCAGGCAACAACAGATTGCAGTGCTGGGGAAGGCAAGGTGATAAATGAATTTCCAAAGAACTCAGGGTCAATATGTGGAACATCTAATGCTAGGAGCTTGTCAAGTAGCTGTTCTTCTGTATCTTCAACTGGAAAGGACATTGATCTTGAGCTAAAGTTTGAACTTGATGCAATTGAGTCACAGTATCAGCATTGGATTGAAGAACTTAATAGGATGAAGTTGGAGGTATTGGAAGCAGCCAGAAGGAGATGGATGGCCAACAAGAAATTAGCTGTTCGATGA 2037 0.4045 MNSGGAVLALPPVGNVFKTREPPDYEEDFVEKDPTGRYLRYNEILGRGAFKTVYRGFDEVDGIEVAWNQVKIDGLLHSVDDLAKLYSEVHLLKSLKHENIIKFYNSWIDDKQKTVNMITELFTSGNLRQYRKKHKYVEMKAIKGWARQILQGLVYLHSHKPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTLEYPYSECNNPAQIFKKVTSGIKPASLNKVSDPQIKKFIEKCLVPASERLSAEELFRDPFLQVENPKDPILYPLQSTVKTPRARSGSPSLSMDIDADYKQLSMSTCSESNQGSPYCPVFEVQRTNKNNEFRLKGTKNDDNSVSLTLRIADTCGRVRNIHFLFYLDTDTAVSVASEMVEHLELADHDVAFIAELIDYLIMKLLPWWKPSPDHNSTREVCLCGGGSTNVDGQTLMACPLGSVLTSIPSESVIDQDDFSGLYTNPKGGVVTAGKSCFFENNAASEGYYNKSPSLVNWEDRYSQGSGASEIVVEDASMKNDNCQDSNVYGSFKCLSRSIFELELGDAYFEGCKLQATTDCSAGEGKVINEFPKNSGSICGTSNARSLSSSCSSVSSTGKDIDLELKFELDAIESQYQHWIEELNRMKLEVLEAARRRWMANKKLAVR* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01658 678 Gene3D Transferase(Phosphotransferase) domain 1 122 301 - -
Rops4g01658 678 Pfam Protein kinase domain 42 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01658 678 FunFam probable serine/threonine-protein kinase WNK9 122 301 - -
Rops4g01658 678 CDD STKc_WNK 37 296 - -
Rops4g01658 678 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 433 IPR024678 GO:0004674|GO:0005524
Rops4g01658 678 Gene3D - 375 454 - -
Rops4g01658 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Rops4g01658 678 FunFam Probable serine/threonine-protein kinase WNK1 24 120 - -
Rops4g01658 678 SUPERFAMILY Protein kinase-like (PK-like) 40 345 IPR011009 -
Rops4g01658 678 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 22 502 - -
Rops4g01658 678 SMART serkin_6 39 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01658 678 Coils Coil 640 660 - -
Rops4g01658 678 Gene3D Phosphorylase Kinase; domain 1 23 120 - -
Rops4g01658 678 ProSiteProfiles Protein kinase domain profile. 39 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01658 Rops-Chr4 40070644 40075053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01658 592 677 MAP Kinase Kinase Kinase AT5G41990 30.233 4.30e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Rops4g01658 Pkinase 5.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01658 K08867 - gmx:100809602 1028.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01658 4 40070644 40075053 Rops4g01658 4 40070644 40075053 ECH