Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01603 ATGGAACAATTTAGACAGATTGGTGAGGCACTTGGGAGTTTGAAGGCGGTGATGGTATTCAGGGAGAATATTCAAATCAATCAGAGACAATGTTGTTTGCTGCTAGATGTCTTCAGTTTTGCATATGAATCTATAGCAGATGAGATTATACAGAACCTGAACTTTGAAGAGAAGAATGGGAAGTGGAAGGTTCTTGAACAGGCCTTGAGAGAGATCTATAGGATTTTCAAAGAGGGAGAAGCTTACATTAGGCATTGCTTGGAAACAAAGGACTGGTGGGCTAAAGCCATTACCTTGTATCACAACACAGACTGTGTTGAGTTTTACATACACAACTTGCTTTGTTGCATGCCAATTGTGATTGAAGCTATTGAATCTGTAGGAGAAGCATCAGGGTTGGATCAGGAAGAGATGCAAAGGAAGAAACTTATCAACTCCAACAAGTATAGGAAAGAATATAGAGACATGAAACTTTTTCAGTGGAAATTTGGGAAGCAGTACCTCATTACTCATGGCTTTTGCAACCGTTATGATACAATTTGGAAGGAAGATAGATGGTTTCTTTCCAACAAACTCCATGAAAAGAAAGTGTCAGGTGCAACAAAGTATGAGAAGAAATTAATAGATCTCCTTTTGAGGAATTTAGAAGGATCAGATTCACTTGAAAGGAAGCTCCTTCCAAGCTCAATATTGGTTGGATCTAAGGACTACCAGGTGAGGAGAAGAATGGGAAATGGGAGTCAGTACAAGGAGATTCAGTGGTTAGGTGAAAGCTTTGTCATAAGACATTTTTCTGGGGACATTGAAGCTTTGGAACCTGAAATCAAAGAACTTTTATCCCTTTCCCACCCAAATATAATGGACTGCCTTTGTGGTTTTACTGATGAGGAGAAGAAAGAATGCTTCTTGTTAATGGAACTGATGAGCAAAACCCTTTGCTCCCACATCAAAGAGATTCATGGCCCAAGAAAGAGAATACCATTCTTGCTTCATGTGGCAATTGATCTTATGCTTCAGATTGCAAGAGGAATGGAATATCTACATTCAAAGAAACTATATCATGGAGAATTAAACCCTTCAAACATTCTTGTCAAGCACAGAAGTACATCCCCGGAAGGTTACTTGCATGCCAAGGTAACAGGGTTTGGCCTATCTTCTGTCAAGGACTTGAACCAGAGAGGGAATACAAACCACAATGGAACTCTCCCATTCATCTGGTATTCTCCAGAAGTGCTTGAAGAGCAAGAAAACTCGGGGGGTGAAGCAAACTCAAAGTACACAGAGAAATCTGATGTGTACAGTTTTGCAATGGTTTGCTTTGAGCTTCTAACAGGAAAAGTCCCTTTTGAAGATAGCCATCTTCAAGGGGAGAAAATGAGCAGAAACATAAGGGCAGGAGAGAGGCCACTTTTTCCTCTCAATTCACCAAAATATGTTATCAACTTGACAAAGAGATGTTGGCATATTGACCCAAATCAACGTCCAAGCTTCTCTTCCATATGTCGAGTTCTTCGTTATATGAAAAGATTTCTTGCATTGAATCCTAGTCACAATAACCAGCCAGACCCACCAGTGCCACCATTAGATTATGGTGATATAGAGTCAGCACTTTTGAGGAAGTTCCCTTCTTGGAGAAGTTCTGAATCATCACCAATATCAAACATTCCATTTCAAATGTTTGCTTATAGAGTTATTGAGCTAGAAAAAATAAATACAAGCTCTAAGGATAACTCTGAATCTGGAAGTGATGCTTCAGCCTGTGGTGATGATCTTGTTACTTCTGGGGATGAGCCATTTCTGTCTACAACTGAAAAGAAATCTTTGCTTGGACCTGATATTATGAACAGGAGGCTTACACTGACCAGGAAATCTCTAGATTTGAAGGCGAACAAACCAGGTACACCAAGAACAAGATCAGCTAGACCTCCACAAATGTCCCCTCGTACAAGGAGTTTGAAGATTAATTCAGAGAACCACCTAATATCAAGTCCAAGAATAATAAGAAGATCATCTTCTGGTCATGTCTCAGACTCTGAGCTTACTTAG 2046 0.3988 MEQFRQIGEALGSLKAVMVFRENIQINQRQCCLLLDVFSFAYESIADEIIQNLNFEEKNGKWKVLEQALREIYRIFKEGEAYIRHCLETKDWWAKAITLYHNTDCVEFYIHNLLCCMPIVIEAIESVGEASGLDQEEMQRKKLINSNKYRKEYRDMKLFQWKFGKQYLITHGFCNRYDTIWKEDRWFLSNKLHEKKVSGATKYEKKLIDLLLRNLEGSDSLERKLLPSSILVGSKDYQVRRRMGNGSQYKEIQWLGESFVIRHFSGDIEALEPEIKELLSLSHPNIMDCLCGFTDEEKKECFLLMELMSKTLCSHIKEIHGPRKRIPFLLHVAIDLMLQIARGMEYLHSKKLYHGELNPSNILVKHRSTSPEGYLHAKVTGFGLSSVKDLNQRGNTNHNGTLPFIWYSPEVLEEQENSGGEANSKYTEKSDVYSFAMVCFELLTGKVPFEDSHLQGEKMSRNIRAGERPLFPLNSPKYVINLTKRCWHIDPNQRPSFSSICRVLRYMKRFLALNPSHNNQPDPPVPPLDYGDIESALLRKFPSWRSSESSPISNIPFQMFAYRVIELEKINTSSKDNSESGSDASACGDDLVTSGDEPFLSTTEKKSLLGPDIMNRRLTLTRKSLDLKANKPGTPRTRSARPPQMSPRTRSLKINSENHLISSPRIIRRSSSGHVSDSELT* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01603 681 MobiDBLite consensus disorder prediction 625 681 - -
Rops4g01603 681 Pfam Protein tyrosine and serine/threonine kinase 269 503 IPR001245 GO:0004672|GO:0006468
Rops4g01603 681 SUPERFAMILY Protein kinase-like (PK-like) 234 534 IPR011009 -
Rops4g01603 681 FunFam Kinase family protein 234 517 - -
Rops4g01603 681 MobiDBLite consensus disorder prediction 637 681 - -
Rops4g01603 681 MobiDBLite consensus disorder prediction 572 608 - -
Rops4g01603 681 ProSiteProfiles Protein kinase domain profile. 237 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01603 681 PANTHER SERINE-THREONINE PROTEIN KINASE 272 507 - -
Rops4g01603 681 Pfam Protein of unknown function (DUF1221) 21 234 IPR010632 -
Rops4g01603 681 Gene3D Transferase(Phosphotransferase) domain 1 234 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01603 Rops-Chr4 39292981 39296087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01603 274 504 MAP Kinase Kinase Kinase AT5G58950 29.487 1.19e-23 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Rops4g01603 PK_Tyr_Ser-Thr 2.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01603 - - gmx:100813704 1157.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01603 4 39292981 39296087 Rops4g01603 4 39292981 39296087 ECH