Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops4g01603 | ATGGAACAATTTAGACAGATTGGTGAGGCACTTGGGAGTTTGAAGGCGGTGATGGTATTCAGGGAGAATATTCAAATCAATCAGAGACAATGTTGTTTGCTGCTAGATGTCTTCAGTTTTGCATATGAATCTATAGCAGATGAGATTATACAGAACCTGAACTTTGAAGAGAAGAATGGGAAGTGGAAGGTTCTTGAACAGGCCTTGAGAGAGATCTATAGGATTTTCAAAGAGGGAGAAGCTTACATTAGGCATTGCTTGGAAACAAAGGACTGGTGGGCTAAAGCCATTACCTTGTATCACAACACAGACTGTGTTGAGTTTTACATACACAACTTGCTTTGTTGCATGCCAATTGTGATTGAAGCTATTGAATCTGTAGGAGAAGCATCAGGGTTGGATCAGGAAGAGATGCAAAGGAAGAAACTTATCAACTCCAACAAGTATAGGAAAGAATATAGAGACATGAAACTTTTTCAGTGGAAATTTGGGAAGCAGTACCTCATTACTCATGGCTTTTGCAACCGTTATGATACAATTTGGAAGGAAGATAGATGGTTTCTTTCCAACAAACTCCATGAAAAGAAAGTGTCAGGTGCAACAAAGTATGAGAAGAAATTAATAGATCTCCTTTTGAGGAATTTAGAAGGATCAGATTCACTTGAAAGGAAGCTCCTTCCAAGCTCAATATTGGTTGGATCTAAGGACTACCAGGTGAGGAGAAGAATGGGAAATGGGAGTCAGTACAAGGAGATTCAGTGGTTAGGTGAAAGCTTTGTCATAAGACATTTTTCTGGGGACATTGAAGCTTTGGAACCTGAAATCAAAGAACTTTTATCCCTTTCCCACCCAAATATAATGGACTGCCTTTGTGGTTTTACTGATGAGGAGAAGAAAGAATGCTTCTTGTTAATGGAACTGATGAGCAAAACCCTTTGCTCCCACATCAAAGAGATTCATGGCCCAAGAAAGAGAATACCATTCTTGCTTCATGTGGCAATTGATCTTATGCTTCAGATTGCAAGAGGAATGGAATATCTACATTCAAAGAAACTATATCATGGAGAATTAAACCCTTCAAACATTCTTGTCAAGCACAGAAGTACATCCCCGGAAGGTTACTTGCATGCCAAGGTAACAGGGTTTGGCCTATCTTCTGTCAAGGACTTGAACCAGAGAGGGAATACAAACCACAATGGAACTCTCCCATTCATCTGGTATTCTCCAGAAGTGCTTGAAGAGCAAGAAAACTCGGGGGGTGAAGCAAACTCAAAGTACACAGAGAAATCTGATGTGTACAGTTTTGCAATGGTTTGCTTTGAGCTTCTAACAGGAAAAGTCCCTTTTGAAGATAGCCATCTTCAAGGGGAGAAAATGAGCAGAAACATAAGGGCAGGAGAGAGGCCACTTTTTCCTCTCAATTCACCAAAATATGTTATCAACTTGACAAAGAGATGTTGGCATATTGACCCAAATCAACGTCCAAGCTTCTCTTCCATATGTCGAGTTCTTCGTTATATGAAAAGATTTCTTGCATTGAATCCTAGTCACAATAACCAGCCAGACCCACCAGTGCCACCATTAGATTATGGTGATATAGAGTCAGCACTTTTGAGGAAGTTCCCTTCTTGGAGAAGTTCTGAATCATCACCAATATCAAACATTCCATTTCAAATGTTTGCTTATAGAGTTATTGAGCTAGAAAAAATAAATACAAGCTCTAAGGATAACTCTGAATCTGGAAGTGATGCTTCAGCCTGTGGTGATGATCTTGTTACTTCTGGGGATGAGCCATTTCTGTCTACAACTGAAAAGAAATCTTTGCTTGGACCTGATATTATGAACAGGAGGCTTACACTGACCAGGAAATCTCTAGATTTGAAGGCGAACAAACCAGGTACACCAAGAACAAGATCAGCTAGACCTCCACAAATGTCCCCTCGTACAAGGAGTTTGAAGATTAATTCAGAGAACCACCTAATATCAAGTCCAAGAATAATAAGAAGATCATCTTCTGGTCATGTCTCAGACTCTGAGCTTACTTAG | 2046 | 0.3988 | MEQFRQIGEALGSLKAVMVFRENIQINQRQCCLLLDVFSFAYESIADEIIQNLNFEEKNGKWKVLEQALREIYRIFKEGEAYIRHCLETKDWWAKAITLYHNTDCVEFYIHNLLCCMPIVIEAIESVGEASGLDQEEMQRKKLINSNKYRKEYRDMKLFQWKFGKQYLITHGFCNRYDTIWKEDRWFLSNKLHEKKVSGATKYEKKLIDLLLRNLEGSDSLERKLLPSSILVGSKDYQVRRRMGNGSQYKEIQWLGESFVIRHFSGDIEALEPEIKELLSLSHPNIMDCLCGFTDEEKKECFLLMELMSKTLCSHIKEIHGPRKRIPFLLHVAIDLMLQIARGMEYLHSKKLYHGELNPSNILVKHRSTSPEGYLHAKVTGFGLSSVKDLNQRGNTNHNGTLPFIWYSPEVLEEQENSGGEANSKYTEKSDVYSFAMVCFELLTGKVPFEDSHLQGEKMSRNIRAGERPLFPLNSPKYVINLTKRCWHIDPNQRPSFSSICRVLRYMKRFLALNPSHNNQPDPPVPPLDYGDIESALLRKFPSWRSSESSPISNIPFQMFAYRVIELEKINTSSKDNSESGSDASACGDDLVTSGDEPFLSTTEKKSLLGPDIMNRRLTLTRKSLDLKANKPGTPRTRSARPPQMSPRTRSLKINSENHLISSPRIIRRSSSGHVSDSELT* | 682 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops4g01603 | 681 | MobiDBLite | consensus disorder prediction | 625 | 681 | - | - | |
Rops4g01603 | 681 | Pfam | Protein tyrosine and serine/threonine kinase | 269 | 503 | IPR001245 | GO:0004672|GO:0006468 | |
Rops4g01603 | 681 | SUPERFAMILY | Protein kinase-like (PK-like) | 234 | 534 | IPR011009 | - | |
Rops4g01603 | 681 | FunFam | Kinase family protein | 234 | 517 | - | - | |
Rops4g01603 | 681 | MobiDBLite | consensus disorder prediction | 637 | 681 | - | - | |
Rops4g01603 | 681 | MobiDBLite | consensus disorder prediction | 572 | 608 | - | - | |
Rops4g01603 | 681 | ProSiteProfiles | Protein kinase domain profile. | 237 | 511 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops4g01603 | 681 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 272 | 507 | - | - | |
Rops4g01603 | 681 | Pfam | Protein of unknown function (DUF1221) | 21 | 234 | IPR010632 | - | |
Rops4g01603 | 681 | Gene3D | Transferase(Phosphotransferase) domain 1 | 234 | 520 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops4g01603 | Rops-Chr4 | 39292981 | 39296087 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops4g01603 | 274 | 504 | MAP Kinase Kinase Kinase | AT5G58950 | 29.487 | 1.19e-23 | 103 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL_Gdt | Rops4g01603 | PK_Tyr_Ser-Thr | 2.4e-39 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops4g01603 | - | - | gmx:100813704 | 1157.51 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops4g01603 | 4 | 39292981 | 39296087 | Rops4g01603 | 4 | 39292981 | 39296087 | ECH |