Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01602 ATGTCACTGTGCATCTTCACCACCATGTTCCTCCTCTCAGTGCAGAGTGTAGGATCCTCCATTAACAGAAGGATCCTCCACCAACCCTTTCTCCCACAAGACACACTCCCTCCTTCTCAACCTCCAAACCCACCTCCACCTTCTCCTTCTCCTTCACCTCCAAACCCAAAGTACCCATTTTCCAACACCCCTAACACTACTACTAGTTCAACACCTTTTTTCCCCACTTACCCTTCTCCACCACCACCTCCTTCTCCTTCTTCTTTTGCTTCTTTCCCAGCTAATATCTCTTCTCTTATTCTCCCTCAATCCCCCAAATCCAAATCTTCTTCTTCCAAGCTCCTCGCCGTCGCCATTGCCGCCGTTGTTTGTGCCATCGCCGTCGTCGCCGTCTCTGCTTTTGTCTACTGTCGCCGTCGTCGGAAAAACTACTCAGCCGACGAAAAAACCCTCAGATCCGACAGCAGCATTCGTCTATTCCCTCGTGAAGCTACCGCCGGTGCCGTCGCCGGAAACCGGAAAACGAGGAATGTTTCTTCCACTAGCTCTGAGTTTCTTTACCTCGGCACCATTGTTAACTCCCGCGGCGATGATCTTCCCTCCGATGCCGGTGGTGGTGGTGCTATTAATCCGAGGAAAATGGACTCGCCGGAGCTTCAGCCTCTTCCGCCGTTGTTACGGCAAGTTTCGAGGTTGAACAATGAAGCGACGGTGGAGGATGAAGAGGAGTTTTACTCTCCGAAAGGGTCTTTGGGTGGCCGTGAAGGTTCAACCGGAACCGGATCGGGTTCCCGGAGAGTTTATTCCGGCATTGATGTTGAGAATTTCGTGGGTCGAAGTAGCACTGAATCAACCTCTTCTTATTCTTCTTCCTCTTCTGCTTCACCGGATCGGTCTCATTCCATTAGTCTCTCTCCGCCTGTGAGTATAAGCCCAAGACGATCACAACCCAAGTCGCCGGAAAATACACTAACCGACCATTCTCATCCTCCTCCACCGCCGGTGTCGGCACCGACACAACTACCCTCCGGTGGTGACGTTACAAGCTCGTTATCCTCATCCACACACTCATCACCACAACCATCTTACAACCAGCACGTGCAAACTTCTTCATCGCTGGAGAAAGTCTTCGCCGGAGAGTGTCATTCACCGTCTCTGTCACCGCTCACCCTGTCACCGAAGAAAAACCCAGATGGGTCTGTTGTTTCACTTGAAAAGACTCAATCTTTACATTCATCATCTAGGAAAAAGGAAGATGCTTCTTCACCAAGGTTGTCCAATGTTTCTTCTTCAAGTGGAAAATCGGTTTCTTCTTCTTCGGCGTTTACTCTGCCGTCACCGGATAATGTTCTGGCGATGAATCAGCATCATGGGTTGGATCAATCTCCAACTATATCAGATGTTTCAGATCGGTATAGACATTCTCCTCTTTCATCACTTCCTTTGTCACCAACCCTTCTTTCTTCACCAGAGAGAGAGTTGAACTTGAACTTGAACCTGAACCCTCAAACAGCACCTTCTAGAAAGCATTGGGAGATTCCAGACCTCTTAACAGGTGAATCACCAACTGTTTTGGTTCAACCTGTGGTGTCTCAAAGAAAACATTGGGAAATTCCTGTTCTTTCAACATCAATTGCACCTTCTATTAAGGTTTCAGCCCCTCCTCCACCGCCGCCGCCGCCGCCACCACCACCACTGCCACGGCAGAGGAAGCAGTGGGAAGTGCCTTCTCCTTCAACCCCTGTCGGTCAACAAGTTTCTAGGCCACCAGAACTGAAGCCTCCATCAAGGCCTTTTGTGTTGCAAACCCCAAATAATAAGGTTTCACCTGTTGAGTTGCCTCCAAGTTCTCAGAATTTGGGAGTGATTGAGGAGAATCATGAGGAGGCTTCTAAGCCTAAGTTGAAGCCTTTGCATTGGGATAAAGTGAGGGCCAGTTCTGATCGTGAAATGGTGTGGGATCATTTGAGGTCCAGCTCCTTTAAGTTGAATGAGGAGATGATTGAAACGTTGTTTGTAGTGAACACACCGAACCCAAAACCCAAGGATACTACTTCACGTTCAGTTCTTGCCCCACAAAATCAGGAGGATAGGGTATTGGATCCTAAAAAGTCCCAAAATATTGCTATCTCGCTGAGAGCACTAAACGTGACTATAGAAGAAGTGTGTGAAGCACTGTTAGAAGGTATTACTGATACACTTGGAACTGAACTACTTGAAAGCTTGTTAAAAATGGCACCAAGCAAGGAAGAAGAACGGAAATTGAAGGAACATAAAGATGACTCCCCAACTAAGCTTGGTCCTGCTGAGAAATTTTTGAAGGAAGTGCTTGATGTGCCCTTTGCATTTAAAAGGGTGGAAGCTATGCTTTACATGGCTAATTTTGAGTCAGAAGTGGAGTATCTTAGGAAATCCTTTCAAACTCTGGAGGTTGCCTGTGAAGAGCTACGGAATAGTAGAATGTTCTTGAAGCTTCTAGAGGCCGTGCTTAAAACTGGGAACCGCATGAATGTAGGGACAAACCGTGGTGATGCACACGCTTTCAAGCTTGATACACTTCTCAAGCTTGTTGATGTCAAAGGTGCAGATGGGAAAACCACTCTATTGCACTTTGTTGTACAAGAAATCATCAGAACTGAAGGAGCTCGTCTCTCAGGTACTAATCAAACACCAAGCACAACTTCGAATGAAGATGCCAAGTGTAGGAAGCTTGGCCTGCAAGTAGTTTCAAGTCTAAGTTCTGGGTTAGCAAATGTTAAGAAGGCTGCTGCTATGGATTCTGAAGTTCTCAGCAGTGAAGTCATTAAACTTTCCAAAGGAATTGCACAAATTAAAGAGGTTGTAGAATTAAATGAAACAGCAGGGTCAGATGACAGCATTAAGAAATTCACAGAATCAATGAACAAGTTCATGAGAATGGCTGAGGAAGAGATTCTAAGAATTCAGGCTCAAGAAAGTGTTGCTTTATCCCTTGTGAAGGAGATCACAGAGTATTTCCATGGGAACTTGTCCAAGGAAGAAGCTCATCCATTTAGAATCTTCATGGTAGTTAGAGACTTTTTAACAGTTCTTGACCGTGTATGCAAAGAAGTTGGTATGATAAATGAGAAAACCATGGTTAGTTCTGCTCATAGATTCCCTGTTCCAGTTAACCCTATGCTTCCACAACCACTCCCTGGACTAATTGGAAGGCGACAATACAACTCCTCAGATGATGATGATAGTCCATCTCCTTAG 3237 0.4618 MSLCIFTTMFLLSVQSVGSSINRRILHQPFLPQDTLPPSQPPNPPPPSPSPSPPNPKYPFSNTPNTTTSSTPFFPTYPSPPPPPSPSSFASFPANISSLILPQSPKSKSSSSKLLAVAIAAVVCAIAVVAVSAFVYCRRRRKNYSADEKTLRSDSSIRLFPREATAGAVAGNRKTRNVSSTSSEFLYLGTIVNSRGDDLPSDAGGGGAINPRKMDSPELQPLPPLLRQVSRLNNEATVEDEEEFYSPKGSLGGREGSTGTGSGSRRVYSGIDVENFVGRSSTESTSSYSSSSSASPDRSHSISLSPPVSISPRRSQPKSPENTLTDHSHPPPPPVSAPTQLPSGGDVTSSLSSSTHSSPQPSYNQHVQTSSSLEKVFAGECHSPSLSPLTLSPKKNPDGSVVSLEKTQSLHSSSRKKEDASSPRLSNVSSSSGKSVSSSSAFTLPSPDNVLAMNQHHGLDQSPTISDVSDRYRHSPLSSLPLSPTLLSSPERELNLNLNLNPQTAPSRKHWEIPDLLTGESPTVLVQPVVSQRKHWEIPVLSTSIAPSIKVSAPPPPPPPPPPPPLPRQRKQWEVPSPSTPVGQQVSRPPELKPPSRPFVLQTPNNKVSPVELPPSSQNLGVIEENHEEASKPKLKPLHWDKVRASSDREMVWDHLRSSSFKLNEEMIETLFVVNTPNPKPKDTTSRSVLAPQNQEDRVLDPKKSQNIAISLRALNVTIEEVCEALLEGITDTLGTELLESLLKMAPSKEEERKLKEHKDDSPTKLGPAEKFLKEVLDVPFAFKRVEAMLYMANFESEVEYLRKSFQTLEVACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARLSGTNQTPSTTSNEDAKCRKLGLQVVSSLSSGLANVKKAAAMDSEVLSSEVIKLSKGIAQIKEVVELNETAGSDDSIKKFTESMNKFMRMAEEEILRIQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDRVCKEVGMINEKTMVSSAHRFPVPVNPMLPQPLPGLIGRRQYNSSDDDDSPSP* 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01602 1078 MobiDBLite consensus disorder prediction 1059 1078 - -
Rops4g01602 1078 MobiDBLite consensus disorder prediction 341 376 - -
Rops4g01602 1078 MobiDBLite consensus disorder prediction 279 441 - -
Rops4g01602 1078 MobiDBLite consensus disorder prediction 197 267 - -
Rops4g01602 1078 MobiDBLite consensus disorder prediction 234 248 - -
Rops4g01602 1078 MobiDBLite consensus disorder prediction 31 88 - -
Rops4g01602 1078 MobiDBLite consensus disorder prediction 423 441 - -
Rops4g01602 1078 SUPERFAMILY Formin homology 2 domain (FH2 domain) 555 1037 - -
Rops4g01602 1078 SMART it6_source 625 1039 IPR015425 -
Rops4g01602 1078 MobiDBLite consensus disorder prediction 34 60 - -
Rops4g01602 1078 MobiDBLite consensus disorder prediction 385 409 - -
Rops4g01602 1078 MobiDBLite consensus disorder prediction 459 487 - -
Rops4g01602 1078 MobiDBLite consensus disorder prediction 74 88 - -
Rops4g01602 1078 MobiDBLite consensus disorder prediction 549 614 - -
Rops4g01602 1078 Pfam Formin Homology 2 Domain 628 1024 IPR015425 -
Rops4g01602 1078 PANTHER FORMIN-RELATED 383 1069 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Rops4g01602 1078 ProSiteProfiles Formin homology-2 (FH2) domain profile. 625 1050 IPR015425 -
Rops4g01602 1078 MobiDBLite consensus disorder prediction 550 571 - -
Rops4g01602 1078 MobiDBLite consensus disorder prediction 599 614 - -
Rops4g01602 1078 Gene3D Formin, FH2 domain 619 1034 IPR042201 -
Rops4g01602 1078 MobiDBLite consensus disorder prediction 279 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01602 Rops-Chr4 39283102 39287517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01602 573 1066 FH2 protein (formin) Gene Family AT3G25500 74.900 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01602 - - gmx:100802678 1269.6