Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01582 ATGGGAAACAGTGAGGATGGGAAATCTGTTAAAACTGAAAAGCCTTCTTCACCTGTAACAACTGATCAGACCAATCAGGCCAACCAGCCTAACCTTCATGTCTGGGCCGCCATGCAGGCATATTATGGGCCGAGAATCAATGTTCCACCACCATACTTCAACTCAGCTGTTGCTTCTGGTCATGCTCCTCACCCATACATGTGGGGGCCACCACAGCCTATGATGCCACCATATGGGCCGCCTTATGCAGCATTTTATTCACATGGAGGGGTTTATACTCACCCTGCAGTTACTATCGGGCCAAACTCACATTGTCAAGGAATTCCATCTTCACCTGCTGCTGGGACTCCTTCAAGCATTGACACACCAACCAAATTATCTGGAAATTCTGATCAGGGTTTAATGAAGAAATTGAAAGGATTTGATGGGCTTGCAATGTCAATAGGCAATTGCAATGCTGAGAATGCTGAGCATGGAGCTGAAAACAGGCTGTCACAAAGTGTGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTGCAGGGACTAATCAAACAGGAAGGAAAAGAAGCCGTGAAGGAACGCCAACCACTGATGGAGAAGGGAAAACTGAGACACAAGATAGTCCTGTCTCCAAAGAGACTGCAGCTTCAAAGAATATGGTGGCAGTTACCACAGCCAGTGTTGCAGGAAAATTAGTTGGACCTGTAGTTTCTTCAGGTATGACCACAGCACTGGAGCTGAGGAACCCTTCAACTATTCCTTCTAAGACAAGTTCCACAAGTGCCTCTCCACAACCTTGTGGAGTTTTGCCTTCTGAAGCTTGGATACAGAATGAGCGTGAGCTGAAACGTGAGAGGAGGAAACAATCAAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCTGAGACTGAAGGATTGGCACGAAAAGTTGATACCTTGACTGCTGAGAATTTGTCCCTGAAATCAGAAATAAATCAATGGACTGAAAGTTCTGAGAAGCTGAGGATGGAAAATGGCACATTAAGGGAAAAACTGAAAAATACTCAACTGGGACAAACAGAAGGGATAATTTTGAACAGCATTGACAAGAGGGCTACACCTGTAAGTACAGAAAACTTACTATCAAGAGTTAATAATTCCAGTTCTAATGATAGAACTGCAGAGGAAGAGAATGATTACTGTGAGAACAAACCAAATTCTGGTGCAAAGCTGCATCAACTACTGGATACAAATCCAAGAGCTGATGCTGTTGCAGCTGGTTGA 1278 0.4491 MGNSEDGKSVKTEKPSSPVTTDQTNQANQPNLHVWAAMQAYYGPRINVPPPYFNSAVASGHAPHPYMWGPPQPMMPPYGPPYAAFYSHGGVYTHPAVTIGPNSHCQGIPSSPAAGTPSSIDTPTKLSGNSDQGLMKKLKGFDGLAMSIGNCNAENAEHGAENRLSQSVDTEGSSDGSDGNTAGTNQTGRKRSREGTPTTDGEGKTETQDSPVSKETAASKNMVAVTTASVAGKLVGPVVSSGMTTALELRNPSTIPSKTSSTSASPQPCGVLPSEAWIQNERELKRERRKQSNRESARRSRLRKQAETEGLARKVDTLTAENLSLKSEINQWTESSEKLRMENGTLREKLKNTQLGQTEGIILNSIDKRATPVSTENLLSRVNNSSSNDRTAEEENDYCENKPNSGAKLHQLLDTNPRADAVAAG* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01582 425 MobiDBLite consensus disorder prediction 252 272 - -
Rops4g01582 425 MobiDBLite consensus disorder prediction 201 219 - -
Rops4g01582 425 SMART brlzneu 281 345 IPR004827 GO:0003700|GO:0006355
Rops4g01582 425 MobiDBLite consensus disorder prediction 381 425 - -
Rops4g01582 425 MobiDBLite consensus disorder prediction 286 310 - -
Rops4g01582 425 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 288 303 IPR004827 GO:0003700|GO:0006355
Rops4g01582 425 Pfam G-box binding protein MFMR 1 97 IPR012900 -
Rops4g01582 425 SUPERFAMILY Leucine zipper domain 284 340 IPR046347 GO:0003700|GO:0006355
Rops4g01582 425 CDD bZIP_plant_GBF1 286 330 IPR045314 GO:0003700|GO:0006355
Rops4g01582 425 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 346 IPR004827 GO:0003700|GO:0006355
Rops4g01582 425 MobiDBLite consensus disorder prediction 13 31 - -
Rops4g01582 425 MobiDBLite consensus disorder prediction 159 192 - -
Rops4g01582 425 MobiDBLite consensus disorder prediction 104 133 - -
Rops4g01582 425 MobiDBLite consensus disorder prediction 1 31 - -
Rops4g01582 425 Pfam Disordered region downstream of MFMR 131 259 - -
Rops4g01582 425 MobiDBLite consensus disorder prediction 104 131 - -
Rops4g01582 425 MobiDBLite consensus disorder prediction 157 219 - -
Rops4g01582 425 Pfam bZIP transcription factor 281 343 IPR004827 GO:0003700|GO:0006355
Rops4g01582 425 MobiDBLite consensus disorder prediction 252 269 - -
Rops4g01582 425 Gene3D - 284 338 - -
Rops4g01582 425 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 397 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01582 Rops-Chr4 39052188 39057244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01582 1 425 bZIP Transcription Factor Family AT2G46270 49.309 9.02e-108 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops4g01582 MFMR_assoc 4.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01582 K09060 - gmx:778133 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01582 4 39052188 39057244 Rops4g01582 4 39052188 39057244 ECH