Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01570 ATGCTTAGGGTTTGCTATGTTCGTCTTTTTTGTCATAAGAAGGGGAGTCAGTTTGTGGCTTGGCAACACCTCTCTTTTGTTGAGGGCATGCGAGATGTGTCTATTTTAGAGGCGATGCTTGAATCTGGAGCAAGGCAAGGTGAGCTAGTTCATGTGAAAAGTTCTGAGGAGCGTGTTGTAAAGAACATTGCAGACATGTCAGGAAAATGCTTAGTTTCAATTTCAGCTTGGAATTCAGCGAGCTTCGAGTTTTATGAACAAGTGCTTAGAACATTGCAGACATGTCAGTGCTTAGTTTCAATTTCAGCTTGGAATTCAGCGAGCTTCAAGTTTTATGAACAAGTGCTTAGCAAGTACCAGAGTTCAGCTCCCTTAAAAGGGAAAATAAACTTCTTTTGGAACGCAACAGGCCTCATGTTGCAAGAATTTCTATCTTTGAGGTGTGCTATAACGATTAAGAACCGTGCCTTTTCTTTTATGCATTACCCTAAACCATATTTTGTTGGAAGCAAAAAGGTGCTTGGTGTTTTCCTTATAACATGGGATGCAGTGGGCAAGGGAAGCTTGCTTTCATTTCTCAAGGCTAGATGGTGGGCTACATCTCTGTCCGATGGTGTTGGGGATGAAGGAATTTATTGTTCATCTATAACTTATATCTTCATCAAGTCCATACACCTCACTGATTCTAGTGTAGAAAAAGGTTGGAAGCATCTTTTAACCTCTAGGAGCTACCATTTCATCATACCAATGGATGACCAGTGGCTTGGACCCTTAGGTTCAGGTGTTCTTGCTGATAAAAATGGCCATATATTACATGGGGTGATTCACAGCAATGGCTATGGTCATTTGCTATGTCTTAATGGCATTGAAGGAGGTTCCAAAATCCTCAAGGGGAGAGAGATCATGGATTTATGGGACAGGATCTGCACTAGCTTGGAAGCAAGGGCAATTTCATTGTTCGATGATTCAAAAAAGAAGCTCATGGATCTTCGCTTGCTTCATGGAATTGCATATGGACATTCATGGTTCAGAAAGTGGGGTTATAATTGTTTTCGTGGAAGCTTTGGAGTAACAGAACAACAATACAAAGAGGCAATGGACAATTTCGCATCATTGATTCTTGATGACTTGGTAGAGAACCAAGATGAAGATTTAAGAAATACTGTGAATTGGTACAGGCATCATAGTGAAGGCTTTCTCTCTTCAATCAGGGATCTTCTAAGGTTTATGCTTACTATCAGGAGGACCAAGATAACAGTCCCTGCTGCTGCTGCTAATTTCAGGAATTTCAGAGATGCTGTGAGTAATGAGAGAACCAAGTGGAACATGGAGCAGCTGGAAGCAGCTGCTAAAGCAGCAGTGAAGGTACTAAAAGACCATAAGGTTGGAAATCAATATTGTGCCATGACGAGCAACGATCTCAAAGATTTTGTGAGGAATGAAATTCATAATACAGGATTACTAGGTTTTGTTCTAAAGTCACTCCACAACGTTAGGGTTGACAATTATGTTGTGACCCGCAAGGAGGACCCAAGAAGTAGGGAGTACTACTACACTGTTCATGAGGTACTGGCTCATGTAGATCCCCAAGTAGAGTCATCTACTAGAGTGCCTGGAAATGATGTTTACAGAGATGTAATGTACCTGTATAAGTTCCTATCAGGGTATGAGCCAATGAATACTCCAAAAAAGAGAATTTTGGGTGGCAGGCACCTTGTGAAGGCATGGCCTTTACCAAGGGATGAAATAGGAACATATGTGTTCACTTTTTGCCTAAAACCAGGTTTCGTGGATGAGGAGGGAGATAATTCTGAGTCGAAAGGCCCACCTTGTAGTGAGATTGTCAAGGTTCCACAGCATGCTACTTTTGGAGATTTAAAAGCTGCAATTCAAATTCCAATGAGAGAGACTTATCATGTCACAAGAGACTTTGAAGTGACAGAGATTGGACCAGTTAAACTTGCTATTGATGATCAAATCCTTTCGGGATTGATCAAGTCAGGTGAAGAGGTTTGGGTAAAGGGAACTTCTTTAGACCCGACTGCTGCGTATAGATATCAAGTGTTGCCTAACCAAAGGAAGATTAAATGTAATTGTGGGGTGGAACATGATGACGGGGAGCCAATGGCCCAGTGTTCCATTTGTAGTCTGTGGCAGCATAAGAGTTGCATGACTGATATGGGTTCAAATTTTCTGTGCCCGGTCTGTTTAGAAGATTTGCAAGAATATGATTCTACCCACTAA 2244 0.4149 MLRVCYVRLFCHKKGSQFVAWQHLSFVEGMRDVSILEAMLESGARQGELVHVKSSEERVVKNIADMSGKCLVSISAWNSASFEFYEQVLRTLQTCQCLVSISAWNSASFKFYEQVLSKYQSSAPLKGKINFFWNATGLMLQEFLSLRCAITIKNRAFSFMHYPKPYFVGSKKVLGVFLITWDAVGKGSLLSFLKARWWATSLSDGVGDEGIYCSSITYIFIKSIHLTDSSVEKGWKHLLTSRSYHFIIPMDDQWLGPLGSGVLADKNGHILHGVIHSNGYGHLLCLNGIEGGSKILKGREIMDLWDRICTSLEARAISLFDDSKKKLMDLRLLHGIAYGHSWFRKWGYNCFRGSFGVTEQQYKEAMDNFASLILDDLVENQDEDLRNTVNWYRHHSEGFLSSIRDLLRFMLTIRRTKITVPAAAANFRNFRDAVSNERTKWNMEQLEAAAKAAVKVLKDHKVGNQYCAMTSNDLKDFVRNEIHNTGLLGFVLKSLHNVRVDNYVVTRKEDPRSREYYYTVHEVLAHVDPQVESSTRVPGNDVYRDVMYLYKFLSGYEPMNTPKKRILGGRHLVKAWPLPRDEIGTYVFTFCLKPGFVDEEGDNSESKGPPCSEIVKVPQHATFGDLKAAIQIPMRETYHVTRDFEVTEIGPVKLAIDDQILSGLIKSGEEVWVKGTSLDPTAAYRYQVLPNQRKIKCNCGVEHDDGEPMAQCSICSLWQHKSCMTDMGSNFLCPVCLEDLQEYDSTH* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01570 747 Gene3D - 181 242 - -
Rops4g01570 747 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 212 741 - -
Rops4g01570 747 SUPERFAMILY FYVE/PHD zinc finger 684 738 IPR011011 -
Rops4g01570 747 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 689 746 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01570 Rops-Chr4 38830318 38832736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01570 234 740 PHD Transcription Factor Family AT5G22260 30.435 2.89e-68 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01570 K26271 - gmx:100797388 421.779