Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01560 ATGGCGGAAGAATCGGAGAACAAGGCAGCGAGTGGCGAATCGTTGCTTGAGAAGATCACAGAGAAGCTTCAAGGCCACGATTCTTCCTCCGATTCCGATTCCGATTCCGATTCCGAGAACCATGTCATTTCCTCCGTTAAGGAAAAGGTTTATCGCCTTTTCGGAAGGGAGAAACCCGTTCATTCTGTCCTCGGTGGCGGAAAACCTGCTGATGTGCTCTTGTGGAGGAACAAGAAGATATCTGCTGGTGTACTTGGTGGAGCCACTGCTGTTTGGGTCTTTTTTGAGTTGCTTGAATATCACTTTCTTTCTTTAGTCTGTCACATTTTGATTCTATTGCTTGCGCTTTTGTTTTTGTGGTCCAATGCTCATACCTTTCTTCACAAGACTCCACCTCACATCCCAGTAGTTCATCTTCCCGAAGAACCATTTCTGCAAGTTGCAGCTGCATTGAGAATTGAAATCAACCGAGGATTTGCTGCCTTGCGTGATATTGGTACTGGAAGAGATTTGAAGAAATTCCTCATTGTTGTTGTTGGCTTGTGGATTCTATCAATTGTGGGGAGCTGGTGCAATTTCTTGACCTTGTTCTACATAGCTTTTGTTTTGTTGCACACGGTTCCTGTCTTGTATGATAAGTATGAGGATAAGATAGACCCTCTGGCCGAAAAAGCAGGCATTGAGATTAAAAAGCAGTATGCTGTGTTTGATGCAAAGGTCTTGAGTAAGATCCCAAAGGGTCCGTTGAAAGGCAAGGTAGCTTAG 765 0.4444 MAEESENKAASGESLLEKITEKLQGHDSSSDSDSDSDSENHVISSVKEKVYRLFGREKPVHSVLGGGKPADVLLWRNKKISAGVLGGATAVWVFFELLEYHFLSLVCHILILLLALLFLWSNAHTFLHKTPPHIPVVHLPEEPFLQVAAALRIEINRGFAALRDIGTGRDLKKFLIVVVGLWILSIVGSWCNFLTLFYIAFVLLHTVPVLYDKYEDKIDPLAEKAGIEIKKQYAVFDAKVLSKIPKGPLKGKVA* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01560 254 Pfam Reticulon 70 225 IPR003388 -
Rops4g01560 254 ProSiteProfiles Reticulon domain profile. 69 254 IPR003388 -
Rops4g01560 254 MobiDBLite consensus disorder prediction 22 41 - -
Rops4g01560 254 Coils Coil 2 22 - -
Rops4g01560 254 PANTHER RETICULON 36 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01560 Rops-Chr4 38697514 38699761 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01560 - - gmx:100779788 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01560 4 38697514 38699761 Rops6g02671 6 48071348 48074050 ECH
Rops4g01560 4 38697514 38699761 Rops4g01560 4 38697514 38699761 ECH
Rops8g00969 8 20771113 20776034 Rops4g01560 4 38697514 38699761 PCT