Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01524 ATGGAAGTTGAAATAGAAATCATTTCTAAAGAAGACATCAAACCTTCTTCTCCCACACCCATTCACCTAAGAGACTTCAAATTTTCCGTTTTGGATCAGCTTATTCATGTTCCATATGCTCCAATAATCCTATTCTACCATACCTCACCTGATCACAATGACACAACTACTAGCCTTTCTGAAGTCCCCAAGAGGTTAGAATTGTTGAAGCAATCTTTATCTGAGACACTAACCCAATTCTACCCACTAGGTGGCAGGATCATAGATGACCTGTCCATTGAGTGTGATGATGAAGGGGCTAATTTTGTGGAAGCCCAAGTGAAATGTCCTCTTTCTAAATTTCTTGGCCAACCACAACTGAACTTGCTACAAAAGTTCCTTCCCAGTGTAGAATCAAATTCAGGAAGAACCTATGTGACTAACATTCAAGTAAACATCTTTGAATGTGGGGGAATTGTTATTGGCACATGTATTTCTCACAAGATCATAGATGGGGCTGCACTAAGCACCTTCTTGAAGGGGTGGACAAGTAAGGCTAGGGGTTGCAACCAACTAGCCCAACCCAACTTCATAGCCTCTTCTCTCTTTCCCACAAACAGTTTATGGCTTAGAGACTTATCAAGGGGTATGTGGGGTTCCTTGTTCAGGCAAGGCAAGTGGATAACTAGGAGGTTTCTGTTCAAAAACTCAGATATAGTCACCCTCAAGGCTCAAATATCAGGCACAACAAACTCTTCTCATGTAGTGCAAGACCCTACCCGGGTGGAGATAGTTTCTGCAATGTTATGGAAGTGTTTCATGGCTGTGTCCAAGGCACGGTTTGGTACCCAGAGGCCTTCTTTGATGACTCATTTGGTGAACCTGCGCAGAAAAATAGATGAAGCTCATTGTCCACAACATGCCATGGGAAACCTTCTTTGGTTAGTGGCTGCTGAGCACATGAGTGATCATGAGATTGGGTTGGAAGAGTTGGTGTGTAAGTTGAAGAATGCTATTTCAAAAGTTGATCATGAATTTGTTGAAGAATTGAGAGGTGATAAGGGAAAGTCAATAATACAAGAGTCTCTCAGAGCATTTGGTGAGACAGTATCTAAGAATGAAGTGGACTGTTTTGGGATTAGTAGCTGGTGCAGTCTTGGGTTCTATGAGGCTGATTTTGGGTGGGGAAAACCCACATGGGTGACTTGTGTTCCTTCAACTGGTTCACTGGTTATGAATCTTATCATCTTGGTTGATACCAAGATGCGAGATGGCATAGAAGCCTGGGTTGCCTTGGATGAGCAAGACATGACTCATTTGATAGAAAACCCTGAACTCCTCACCTATGCAACCCTGGATCCAAATCCTTTATCAATGAATTCAGTTGCATGA 1371 0.4252 MEVEIEIISKEDIKPSSPTPIHLRDFKFSVLDQLIHVPYAPIILFYHTSPDHNDTTTSLSEVPKRLELLKQSLSETLTQFYPLGGRIIDDLSIECDDEGANFVEAQVKCPLSKFLGQPQLNLLQKFLPSVESNSGRTYVTNIQVNIFECGGIVIGTCISHKIIDGAALSTFLKGWTSKARGCNQLAQPNFIASSLFPTNSLWLRDLSRGMWGSLFRQGKWITRRFLFKNSDIVTLKAQISGTTNSSHVVQDPTRVEIVSAMLWKCFMAVSKARFGTQRPSLMTHLVNLRRKIDEAHCPQHAMGNLLWLVAAEHMSDHEIGLEELVCKLKNAISKVDHEFVEELRGDKGKSIIQESLRAFGETVSKNEVDCFGISSWCSLGFYEADFGWGKPTWVTCVPSTGSLVMNLIILVDTKMRDGIEAWVALDEQDMTHLIENPELLTYATLDPNPLSMNSVA* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01524 456 PANTHER F21J9.9 6 443 - -
Rops4g01524 456 Gene3D - 1 202 IPR023213 -
Rops4g01524 456 Gene3D - 218 440 IPR023213 -
Rops4g01524 456 Pfam Transferase family 4 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01524 Rops-Chr4 38186910 38187653 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01524 3 394 Monolignol Biosynthesis Gene Families AT5G48930 24.286 9.77e-22 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01524 - - lja:Lj0g3v0064629.1 622.083