Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01522 ATGAAAGTTGAAGTAGAAATCATTTCTAAAGAAGACATTAGGCCTTCTTCACCCACACCTACTCATCTGAGAGACTTCAAACTTTCCCTATTGGATCAGCTTATTCCATCTCCATATGCACCAATAATCCTATTCTATGACACTTCACCTGACAACAGTGACTCAACTAGTCTTTCTGAAGTCCCCATGAGGTTACAAGTGCTGAAGCAATCTTTATCTGAGACACTAACCCAATTCTACCCACTTGGTGGCAGGATCAAAGATGACCTATCCATTGAGTGCAATGATGAAGGGGCTAATTTTGTGGAAGCCCAAGTAAAGTGTTCTCTTTCTAAATTTCTTAACCAGCCACAGTTGAACTTACTGCACAAGTTCCTTCCCAGTGTAGAATCAAATTCAGGAAGAACCTATGTGACTAACATTCAAGTAAACTTGTTTGAATGTGGGGGAATTGTTATTGGCACATGTATTTCTCACAAGATCCTAGATGGGGCAGCACTAAGCACCTTCTTGAAGGGGTGGACAAGCAGGGCTAAGGGTTGTAACCAATTAGTCCAACCCAACTTCATAGCATCTTCTCTCTTCCCTACAAACAGTTTATGGCTCAGGGACTTATCAATGGGTATGTGGGGTTCCTTGTTCAAGAAAGGAAAGTGGATCACAAGGAGGTTTCTGTTCAAAAACTCAGATATAATCACCCTCAAGGCTCAAGTCTCAGACACATCAAACTCTTCCTGTGTAGTGCAAGATGCTACCCGTGTGGAGATAGTTTCTGCAATGTTATGGAAGTCTCTCATGGCCGTGTCCAATGCACGATTTGGTACCCAGAGGCCTTCTTTGATGACTCATTTGGTGAACCTGCGCAGAAGAATAAATGAAGCTCTTTGTCCATGGCATGCCATGGGAAACCTTTTTTGGTTTGTGACAGCTGAGCACATGAGTGGTCATAACATGGGGTTAGAAGAGTTGGTGTGTAAGTTGAGGAATGCAATATCAAAAGTTGATAATGAATTTGTTGAAGAATTAAGAGGTGATAAGGGAATGTCAATTATGCAGGAGTCTCTACGAGCAATAGGTGAGACAGGATCAAAGAATGAAGTGGAATATTTTGGATTTAGCAGTTGGTGCAATCTTGACTTCTATGAGGCTGATTTTGGGTGGGGAAAGCCCATATGGGTGACTAGTGTTCCTTCAAGTGGTTCATTGTTTATGAATCTTATTATCTTGGCTGACACTAGGCTGCAAGATGGCATAGAAACTTGGGTTACCTTGGATGAAGAGGACATGACTCATTTGATAGCAAACCCTGAACTCCTCACTAATGCAATCTTGGATCCAAATCCTTTAGCAATGAGTTCAGTTGCCTGA 1368 0.4189 MKVEVEIISKEDIRPSSPTPTHLRDFKLSLLDQLIPSPYAPIILFYDTSPDNSDSTSLSEVPMRLQVLKQSLSETLTQFYPLGGRIKDDLSIECNDEGANFVEAQVKCSLSKFLNQPQLNLLHKFLPSVESNSGRTYVTNIQVNLFECGGIVIGTCISHKILDGAALSTFLKGWTSRAKGCNQLVQPNFIASSLFPTNSLWLRDLSMGMWGSLFKKGKWITRRFLFKNSDIITLKAQVSDTSNSSCVVQDATRVEIVSAMLWKSLMAVSNARFGTQRPSLMTHLVNLRRRINEALCPWHAMGNLFWFVTAEHMSGHNMGLEELVCKLRNAISKVDNEFVEELRGDKGMSIMQESLRAIGETGSKNEVEYFGFSSWCNLDFYEADFGWGKPIWVTSVPSSGSLFMNLIILADTRLQDGIETWVTLDEEDMTHLIANPELLTNAILDPNPLAMSSVA* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01522 455 Gene3D - 217 439 IPR023213 -
Rops4g01522 455 Pfam Transferase family 4 437 - -
Rops4g01522 455 Gene3D - 1 201 IPR023213 -
Rops4g01522 455 PANTHER F21J9.9 6 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01522 Rops-Chr4 38183871 38185238 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01522 3 404 Monolignol Biosynthesis Gene Families AT5G48930 25.882 1.21e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01522 - - gmx:100305374 637.491