Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01520 ATGCAACTTACCTGTGGCCTCAACTACCTTCCTAGTTCATTAAAAGTTCTTCAATGGAGAGGATGTCCTTTGAAAACCCTGCCACTTACTAATCAACTGGACGAAATTGTTGACCTCAAATTGACTCATAGCAAAATAGAACAACTTTGGCATGGAACAAAGTTTCTTGAAATGTTGAAGTCCATCGATTTGAGTTTTTCCAAGAATCTAAAGCAATCCCCTGACTTTGTTGGGGTTCCAAATCTTGAATCATTGGTTCTTGAAGGTTGTACGAGCTTAACTCAGGTTCATCCATCCCTTTTATGCCACAAGAAACTTATTCTAATGAATTTGAAAGATTGCAAAAGGCTCAAAGCTCTTCCATGTAAAATGGAGATGAGTTCCTTGAAGGATTTAAATCTTTCTGGTTGCTCTGAATTTAAATATCTTCCAGAGTTTGGGGAAAGCATGGAAAATCTATCAAAGCTTTCTTTAGAGGGGACTGCTATAACAAAACTACCCTCATCACTGGGATGTCTAGTTGGCCTTGCTCTCTTGGATTTGAAGAATTGCAAGAATCTTGTTTCCCTTCCAGATACCATTGGTGAATTGAAGTCCCTCTTAATTCTGAATGTTTCTGGCAGCTCAAAACTCCATAGCTTGCCAGAGAGTTTAAAGGAAATCAAGTGTTTGGAGGAACTTTGTGCAAGTGAAACTGCTATTGAGGAGCTGCCTTCATCTGTCTTTTATCTGGAAAATCTCAGATCAATATCGTTTGCTGGATGCAAAGGGCCAGTGTCTAAGTCGGTGAATATGTTTTTTCTCCCCTTTAAGTGGCTGTTTGGGAGTCAGCAAGATCCTATTGGATTTAGATTGCCACCTTCTAGATTGTGTCTACCCTCTTTGAGTTACCTAAATTTAAGTTACTGCAATCTATCTGAAGAATCAATGCCAGATGGATTTTGCCACTTATCTTCATTGGTTAGTTTAAATCTCACTGGCAACAATTTTGTGAACCTACCAAGTAGCATTTCCAAACTTCCAAAGCTTAAGTATCTTCGCCTAAACTGGTGCGAAAAGCTTCAACAGTTGCCAGAGTTTCCATCATGCTTACATCAATTGGATGCAAGTAATTGTGCGTCACTGGAAACTTCCAAATTCAACCCATCCAGGCCATGCAGTCTCTTTGCAACACCTACACAATGGAACTTACCTGGAGAACTAAAGAGCTTTATAAAGGGATCCTGTCTTCCCCAAGCAAGATTTGACATGCTTATCTCAGGGAGTGAAATCCCATCATGGTTTGCCCCTCAAAAATGTGTTTCTTTTGCAAAAATATCAGTCCATCATAATTGTCCTCCAACTGAATGGGTGGGATTTGCTTTGTGTTTTCTGTTGCACCAGGGATTTACCTCCTATGGAGCCGTATTACCCTCACCTTTATGTTCTCTATTTGTCCGTTGA 1443 0.3992 MQLTCGLNYLPSSLKVLQWRGCPLKTLPLTNQLDEIVDLKLTHSKIEQLWHGTKFLEMLKSIDLSFSKNLKQSPDFVGVPNLESLVLEGCTSLTQVHPSLLCHKKLILMNLKDCKRLKALPCKMEMSSLKDLNLSGCSEFKYLPEFGESMENLSKLSLEGTAITKLPSSLGCLVGLALLDLKNCKNLVSLPDTIGELKSLLILNVSGSSKLHSLPESLKEIKCLEELCASETAIEELPSSVFYLENLRSISFAGCKGPVSKSVNMFFLPFKWLFGSQQDPIGFRLPPSRLCLPSLSYLNLSYCNLSEESMPDGFCHLSSLVSLNLTGNNFVNLPSSISKLPKLKYLRLNWCEKLQQLPEFPSCLHQLDASNCASLETSKFNPSRPCSLFATPTQWNLPGELKSFIKGSCLPQARFDMLISGSEIPSWFAPQKCVSFAKISVHHNCPPTEWVGFALCFLLHQGFTSYGAVLPSPLCSLFVR* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01520 480 Gene3D Ribonuclease Inhibitor 125 266 IPR032675 -
Rops4g01520 480 Gene3D Ribonuclease Inhibitor 273 392 IPR032675 -
Rops4g01520 480 Gene3D Ribonuclease Inhibitor 3 124 IPR032675 -
Rops4g01520 480 SMART LRR_typ_2 292 316 IPR003591 -
Rops4g01520 480 SMART LRR_typ_2 317 340 IPR003591 -
Rops4g01520 480 SMART LRR_typ_2 150 173 IPR003591 -
Rops4g01520 480 SUPERFAMILY L domain-like 8 377 - -
Rops4g01520 480 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 145 256 - -
Rops4g01520 480 Pfam Leucine Rich Repeat 37 54 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01520 Rops-Chr4 38152798 38154914 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01520 126 346 WRKY Transcription Factor Family AT4G12020 31.532 1.38e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01520 - - gmx:100815486 663.685