Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops4g01510 | ATGGGTTTTCCGGTGGGTTACGCGGAGGTTTTCTTCCCCAACCTGTTCCTTCACACCTTAGCCTTCCTCGGACTTCTCCGAAACCTCGTATTCATCCTCTTCCACTTCCTCGGACTCTCCGATTTCCTCGAAACCGAGGTTGCCTGGCCGGACCCCACCGGCGGCGTCCGAACCCCCGATTCCGGCAGGACCCCCTCCGTGTCGGCGATGCTGATCCGGGAGCTACTTCCGGTGGCGAAGTTCGGAGACCTCTCCGGCGGCGGCGGCGCCGCCGACGGGGATGGCGGCTGTTCCTGTTGTGCGGTGTGTCTGTTCGAGTTCTCCGAGGAGGAAGAGATCCGGTGCTTGAGGAACTGTAAACACATTTTTCACCGAAGCTGTGTGGACCGTTGGATCGATCATGATCAGAAAACTTGTCCTCTTTGTAGGACCCCCTTTGTACCTGATGATATGCTTGATGATTATAATCAGCGGCTCTGGGCTGCTTCTGGTGTTACTGAGTTTTATGGAGATTACTCTTCTTCCTTCTGA | 531 | 0.5593 | MGFPVGYAEVFFPNLFLHTLAFLGLLRNLVFILFHFLGLSDFLETEVAWPDPTGGVRTPDSGRTPSVSAMLIRELLPVAKFGDLSGGGGAADGDGGCSCCAVCLFEFSEEEEIRCLRNCKHIFHRSCVDRWIDHDQKTCPLCRTPFVPDDMLDDYNQRLWAASGVTEFYGDYSSSF* | 177 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops4g01510 | 176 | ProSiteProfiles | Zinc finger RING-type profile. | 100 | 143 | IPR001841 | - | |
Rops4g01510 | 176 | SUPERFAMILY | RING/U-box | 99 | 150 | - | - | |
Rops4g01510 | 176 | Pfam | Ring finger domain | 100 | 143 | IPR001841 | - | |
Rops4g01510 | 176 | SMART | ring_2 | 100 | 142 | IPR001841 | - | |
Rops4g01510 | 176 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 24 | 162 | - | - | |
Rops4g01510 | 176 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 72 | 148 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops4g01510 | Rops-Chr4 | 38076514 | 38077310 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops4g01510 | 1 | 175 | C3H Transcription Factor Family | AT1G63840 | 46.667 | 2.25e-53 | 166 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops4g01510 | K16281 | - | gmx:100790975 | 278.485 |