Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01504 ATGTCACTTCATTTCTTCTTCATTCTCCTATCTCACTTCACTCTCATTGTTTCTTCTTCTTCTTCTTCTTCCGTTTTAATAACTGGAAACGACACCGTTCTCAGTGAGAACAAAACCTTCGAGCTTGGTTTCTTTAATTTGAGTTCCTTAGGTTGGTACCTTGCAATTCGCTTCACTTCACTCCCATTCCCGAATGTAATATGGGTGGCAAACCGTCACAACCCAGCTTCAACCCAACCCGGTTCAACCCTTCAATTAACCCGAACCGGTCAATTGGTTCTCACTCATTCATCTTCAAACTCAATCCTATGGCAAACCAACAACAACACAAAGGGTCAGGGTTTGAAGCTGAAGCTTCTGGAGAATGGAAACTTGGTGTTGTTAACCCAAGACGGCGTCGTTTCATGGCAGAGCTTCGATGAACCAACTGACACGTGGCTCCCCGGAATGAACCTCACTCGTTTCCGTTCACTTATCTCATGGCGAACTTTAAACGACCCTTCTCCTGGTTTTTATTCCTTGCGGATGAAACCACCGGATTACGGTGAGTTCGAGTTGGTCTTCAACGGCACCGTTTCGTACTGGTCAACCGGGAACTGGACTGGTGGGTCATTTATCAATGTTCCGGAGATGACCGTTCCTTACATTTACCGGTTCGATTTCGAAGACCCGTTTTCCCCAACAGCGTCGTTTGGGTTTTCCGAGAGAGCCTTGGAAAATGGTTTGAGACCTCCGACGATGTTCCGTGTTGAACCGTTCGGGCAGATTCGGCAGTACACGTGGTGGAAGCAGACAGGTTCGTGGAACATGTTTTGGGCCAAACCTGACCCCGTTTGTCAGGTTCGGGGGCTTTGCGGTAGCTTCGGAGTTTGCACCGGTGAAATTTCGAAGCTTTGTGAGTGTGTCGGTGGTTTTGAGCCTGTCGATGGTGATGGGTGGGGTTCGGGTGACCATTCTCGAGGTTGTCACCGTGGTGAAAGCGCGTGTGATCCACGTGATGGGTTTGAAGATCTGGGTGGTGGTGTTAGGTTTGGTAATGATGGTGATAATGTTAATGTGAGTGAGTTTAGAGTTAAATCTAGGAGCTTATGTGAGAATAAGTGTTTGGGTTCTTGTGCTTGTGTTGGTTTGTCATTTGATGAAAGGAGTGGTCTTTGTAGGAATTTTTATGGGTCTCTTTTGGATTTTCAGAATTTAACTTCTTTTGAGAGTGATGGTGATGTTTTGTATCTCAGGGTTCCCAAAGTGGGATCTGTGAGGAAAGGGTTTAATCGTAAGGTATTGAGTGCTACTATTATTGGGTCGGTTGCTGTTTTGGGTTTGGTGGTGGTGACTTTGTTGGGGTTGGTCAAGAGGAGGAGGTTGAAGGATAAGAAGAAGAAGGGGTTGGAGGAAGATGGATTTGTTACTATGTTGAATTTGAAGGTTTTTTCTTACAAGGAGCTTCAGTTGGCTACTAGAGGCTTTTCTGAAAAGGTTGGGCATGGTGGGTTTGGGACAGTTTTTCAAGGGGAGTTGAGTGATTCTACTCTTGTTGCTGTGAAGCGTTTGGAGAGGCCAGGGGGTGGAGAGAAAGAGTTCAGAGCAGAGGTGTCAACAATTGGGAATATTCAGCATGTTAATCTTGTGAGACTCAGAGGTTTTTGTTCTGAGAATTCTCATAGGCTTTTGGTTTATGAATTCATGCAAAATGGTGCCTTAAGTGCTTATCTGCGTAAAGAGGGGCCAAGTTTGAGTTGGGATGTTAGGTTCCGGGTAGCAGTTGGAACAGCTAAAGGGATAGCATATTTACATGAGGAATGTAGAAATTGCATTATACATTGTGATATCAAACCTGAAAACATCCTTTTGGATGGTGATTTCACTGCCAAAGTTTCTGATTTTGGATTGGCAAAGCTCATGGGCAGGGACTTCAGTAGGGTGTTGGTAACCATGAGGGGTACATGGGGTTATGTAGCTCCGGAGTGGATTTCTGGTGTGGCTATTACAACCAAAGCTGATGTTTACAGCTATGGAATGACATTGCTAGAACTAATCGGTGGTCGCCGGAATGTGGAGGCGCCGCCATCTGCTGGTGGTGTTAGAGAGAGTGGTTGTGAGACAGGAGAGAAGTGGTTCTTTCCTCCATGGGCAGCGCAACAGATAATTGAGGGTAATGTAGCTGCTGTGGTTGATAAGAAGCTTGGAAATGTATATGACATTGAGGAGGCTAGGAGGGTTGCTCTGGTGGCAGTTTGGTGCATTCAGGATGATGAAGCAATGAGACCTTCTATGGGTATGGTAGTGAAAATGTTAGAGGGTTTAGTGGAGGTGGATGTTCCTCCACCACCGAAGATGCTACAAGCGTTGGTTTCGGGAGAGTCCTTTCATGGGGTTAAGGTTGATTCAGGCGATGGGGTATCCACTGGTGGAAGCTTATCTGGTGGCAACTTGGAAGTGTCAACTGCTGATTCAGAATCATGTATAGGGGATGTTTTTTCCCCATTGGATGTCAATAACAATGTTCGATGA 2511 0.4576 MSLHFFFILLSHFTLIVSSSSSSSVLITGNDTVLSENKTFELGFFNLSSLGWYLAIRFTSLPFPNVIWVANRHNPASTQPGSTLQLTRTGQLVLTHSSSNSILWQTNNNTKGQGLKLKLLENGNLVLLTQDGVVSWQSFDEPTDTWLPGMNLTRFRSLISWRTLNDPSPGFYSLRMKPPDYGEFELVFNGTVSYWSTGNWTGGSFINVPEMTVPYIYRFDFEDPFSPTASFGFSERALENGLRPPTMFRVEPFGQIRQYTWWKQTGSWNMFWAKPDPVCQVRGLCGSFGVCTGEISKLCECVGGFEPVDGDGWGSGDHSRGCHRGESACDPRDGFEDLGGGVRFGNDGDNVNVSEFRVKSRSLCENKCLGSCACVGLSFDERSGLCRNFYGSLLDFQNLTSFESDGDVLYLRVPKVGSVRKGFNRKVLSATIIGSVAVLGLVVVTLLGLVKRRRLKDKKKKGLEEDGFVTMLNLKVFSYKELQLATRGFSEKVGHGGFGTVFQGELSDSTLVAVKRLERPGGGEKEFRAEVSTIGNIQHVNLVRLRGFCSENSHRLLVYEFMQNGALSAYLRKEGPSLSWDVRFRVAVGTAKGIAYLHEECRNCIIHCDIKPENILLDGDFTAKVSDFGLAKLMGRDFSRVLVTMRGTWGYVAPEWISGVAITTKADVYSYGMTLLELIGGRRNVEAPPSAGGVRESGCETGEKWFFPPWAAQQIIEGNVAAVVDKKLGNVYDIEEARRVALVAVWCIQDDEAMRPSMGMVVKMLEGLVEVDVPPPPKMLQALVSGESFHGVKVDSGDGVSTGGSLSGGNLEVSTADSESCIGDVFSPLDVNNNVR* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01504 836 CDD B_lectin 25 142 IPR001480 -
Rops4g01504 836 CDD STKc_IRAK 493 768 - -
Rops4g01504 836 Pfam Protein kinase domain 490 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01504 836 Gene3D Phosphorylase Kinase; domain 1 450 561 - -
Rops4g01504 836 SMART blect_4 24 142 IPR001480 -
Rops4g01504 836 PIRSF SRK 1 819 IPR024171 GO:0004674
Rops4g01504 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 52 200 IPR036426 -
Rops4g01504 836 FunFam Receptor-like protein kinase 4 449 561 - -
Rops4g01504 836 Gene3D - 18 139 IPR036426 -
Rops4g01504 836 ProSiteProfiles Bulb-type lectin domain profile. 18 140 IPR001480 -
Rops4g01504 836 CDD PAN_AP_plant 354 414 - -
Rops4g01504 836 Pfam S-locus glycoprotein domain 195 307 IPR000858 GO:0048544
Rops4g01504 836 ProSitePatterns Protein kinases ATP-binding region signature. 493 515 IPR017441 GO:0005524
Rops4g01504 836 PANTHER OS07G0415500 PROTEIN 5 777 - -
Rops4g01504 836 ProSiteProfiles PAN/Apple domain profile. 329 414 IPR003609 -
Rops4g01504 836 SMART serkin_6 487 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01504 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Rops4g01504 836 FunFam S-receptor-like kinase 5 562 774 - -
Rops4g01504 836 Pfam D-mannose binding lectin 66 154 IPR001480 -
Rops4g01504 836 SUPERFAMILY Protein kinase-like (PK-like) 470 766 IPR011009 -
Rops4g01504 836 ProSiteProfiles Protein kinase domain profile. 487 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01504 836 Gene3D Transferase(Phosphotransferase) domain 1 562 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01504 Rops-Chr4 37900668 37903535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01504 477 775 Receptor kinase-like Gene Family AT5G20050 45.192 3.98e-78 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops4g01504 Pkinase 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01504 - - lja:Lj0g3v0252549.1 1282.32