Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01496 ATGGAAACTTGTACGGCTCTGTTGATCTTAACGGCGGTGACGGCATACCTACTATGGTTCACCTTCATCTCACGGTCACTGAGAGGTCCACGTGTCTGGCCCCTGTTGGGCAGTCTCCCAGGCCTGATTGAGAATTGTGACCGCATGCATGACTGGATCTGTGACAACCTTCGCGCGTGTGGTGGCACGTACCAAACCTGCATCTGTGCAATACCCTTCTTAGCCAAAAGACAAGGTCTCGTGACTGTCACGTCCGACCCGAGGAACTTGGAGCATATCCTCAAAACCCGGTTCGACAATTACCCCAAAGGTCCCACGTGGCATGCTGTGTTCCATGATCTCTTAGGTGACGGGATCTTCAATTCTGATGGTGACACGTGGCTGTTCCAACGTAAGACCGCCGCACTGGAATTCACCACCAGAACCTTGCGCCAAGCCATGGCTCGTTGGGTTAGCCGAGCCATCAAGGATCGGCTTTGCTTGATCCTCAAGAAAGCCGAGCTGCAAGCCGAGCCAGTGGATCTACAAGACTTGATGCTTAGGCTTACATTTGACAACATTTGCGGCTTGGCTTTCGGGCGGGACCCACAAACCCTGGCTCCAGGGCTACCCGAGAATCGCTTCGCCACGGCTTTCGACCGAGCCACTGAAGCCACACTCCAGCGGTTCATCCTACCAGAGATTCTGTGGAAGGCTAAGAAATGGCTTCGGCTCGGAATGGAAGTCAGCTTGAGCCGAAGCCTTGTCCAGGTGGATGAGCATTTATCAAGTGTGATTGACAAGCGCAAGGTGGAATTGCTGAGTCAGCAAAAAGATGGGACCCACCATGATGACTTGCTTTCTAGGTTTATGAAGAAAAAGGAATATACAGACGAGTTCCTCCAACACGTGGCGTTGAACTTCATCCTAGCTGGACGTGACACGTCATCAGTGGCGCTGAGCTGGTTTTTCTGGTTGGTGATTCAGAATCCAAGGGTGGAGGAGAAGATCCTACGTGAGATCTGCACGGTTTTGATTGAGACACGTGGCGATGACATGGAAAAATGGATGAATGAGCCTTTGGTGTTTGAGGAACTTGACCGTTTGGTTTATCTTAAGGCTGCATTGTCTGAGACACTAAGGTTGTACCCTTCAGTGCCGGAGGATTCTAAACATGTGGTGGCTGATGATGTTTTGCCGGATGGAACTTTTGTTCCGGCGGGGTCGTCGGTGACATATTCAATATATTCAGCTGGGAGATTGAAGTCCACGTGGGGTGAGGATTGCATGGAGTATAGACCTGATAGGTGGTTGTCATTGGATGGAACAAAGTTCATCATGCATGATTCTTTCAAGTTTGTTGCTTTCAATGCTGGTCCTAGGATATGTTTAGGGAAGGATTTGGCATACCTGCAGATGAAGTCCATTGCCGCCGCGGTGCTCCTCCGCCACCGGCTTGTGGTGGTGCCTGGCCATCAGGTGGAGCAGAAGATGTCACTCACCTTGTTCATGAAAAATGGGCTCAAAGTCAATGTGCACAACAGGGATTTAAAGGGAGTTATGGCAAGTATAAAAAAAGAAAGGGAGGGAGAGATTCGAGTGAAAGAGTCCACAGGTTTGAGATGCAATGGAAGTTAA 1617 0.5015 METCTALLILTAVTAYLLWFTFISRSLRGPRVWPLLGSLPGLIENCDRMHDWICDNLRACGGTYQTCICAIPFLAKRQGLVTVTSDPRNLEHILKTRFDNYPKGPTWHAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKDRLCLILKKAELQAEPVDLQDLMLRLTFDNICGLAFGRDPQTLAPGLPENRFATAFDRATEATLQRFILPEILWKAKKWLRLGMEVSLSRSLVQVDEHLSSVIDKRKVELLSQQKDGTHHDDLLSRFMKKKEYTDEFLQHVALNFILAGRDTSSVALSWFFWLVIQNPRVEEKILREICTVLIETRGDDMEKWMNEPLVFEELDRLVYLKAALSETLRLYPSVPEDSKHVVADDVLPDGTFVPAGSSVTYSIYSAGRLKSTWGEDCMEYRPDRWLSLDGTKFIMHDSFKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLVVVPGHQVEQKMSLTLFMKNGLKVNVHNRDLKGVMASIKKEREGEIRVKESTGLRCNGS* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01496 538 FunFam Cytochrome P450 21 511 - -
Rops4g01496 538 CDD CYP86A 67 501 - -
Rops4g01496 538 Gene3D Cytochrome P450 24 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01496 538 Pfam Cytochrome P450 28 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01496 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Rops4g01496 538 SUPERFAMILY Cytochrome P450 27 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01496 538 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01496 538 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01496 538 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01496 538 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01496 538 PANTHER CYTOCHROME P450 19 503 - -
Rops4g01496 538 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01496 538 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01496 538 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01496 538 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01496 538 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01496 Rops-Chr4 37765994 37768639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01496 1 519 Cytochrome P450 AT2G45970 79.463 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01496 K15398 - gmx:100779986 975.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01496 4 37765994 37768639 Rops4g01496 4 37765994 37768639 ECH