Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01491 ATGTTTGCAACTCCACAATCCTCTTGTAATATTGGGCTTCCTGGAATCATGACTAGTAGGAGGGAAATAGTAGAAGAGCCTAATCCACGTGTGGTTAATGACACACTCTATGTTGCTGTGGCAAAAGATGTGAAAGATGGTAAATCAAATTTGATATGGGCAATACACAACTCTGGAGGAAAGAAGATTTGCATCCTTCACGTTCATGTGCCAGCACCTATGATTCCCATGATGGGTGCTAAATTTCCACCAAGTGTACCGACAGAACGGGAAGTTCAAGCATTCCGAGAAACTGAAAGGCGAGACATGGATAAGACTCTGGATGCATATCTTGGTATCTGTCAAAAGATGGGGGTGAGGGCAGAGAAACTGCACATTGAAATGAATTGCATTGAAGAAGGGATTGTAGAACTCATCTCCCAGCATAAAATACAAAAGCTTTTAATGGGAGCAGCTTCTTACAAGTACCACAACAGGAGAATGACGGACCTCAGATCTAAGAAAGCCACCTATGTATGTGAACAAGCTCCAGCTTCTTGTCACATACAATTTCTCTGCAAAGGATTCCTTATACACACAAGGGATCGCAGTTTAGACAGAGGTACATCTCCTTTGGTGCAGCAAATGCCAAACTCTGAAGTGGGGCATTCACCTCCCTTGAGATCTCAGTCTATTTCACTGGGACAAAATCATTGTGTGAAACTAGTTAATCCAGCTCAAGAATCATATCGTAGCGTAAGGTCTGTCAATGATGTACATAGAAGGAGAATTGCATCTGTTTCTTCTTCAGAAAGGTTTTCAAGTCCAAAGAACAAGTTGGGTAAAGAAGTAAGTTCTGATGAGTCAGATGGTTTGTCAAGATGGAGTCCTTCAGTTTGCTCAATGTGCTCAGCCAGTGGTTCAGGTGAACCAGTATTGACCCCAAATTTGAATAGTGATGTCAGTGAGAATGTATTGAGGTTGAATTTGAGTGGCCTTTCTAGTATTAAAGAGGATCTTCATCACTCATCACCTCATAGTGTACTGGATGGGGGAATGGATGATACTTTGTATGATCAACTTGAACAGTTTATGGCTGAGGCTGAGAATGCTAGGAGGAATGCATATCAAGAAACTGTTAGGCGTATGAAAGCTGAAAAGGATGCCACTGATGCTATACGAAAGATTAAAGCCACTGCAATCTTGTATAATGAAGAGTTGAAACTAAGGAAAGAGTTAGAGGAAGCACTAAAGAAAGCAAAAGAAGAAATTGATAATATGAGGAGCCAAATAGAAAAAGTTGATGAAGAACTCCAACTTGCACTAGAACAAAAGTCATCACTAGAGAATCAAATGGCATCAACTGAACTTACTCTAAAGGAGTTGGAGCAGAAGAACATGTCTGAGGCAGATTTGTTAGAAAACTACAAGAATGAAAGAGATGATATGCAAATGCAGCGTGATAATGCATTGAGAGAGGCTGAAGAGTTAAGGAGAAAACAAGGAGAGACCTCAAGTGCTAATGCCTTTCAACTCTTCTCAGAATTCTCTTTTTCAGAGATTGAAGAAGCAACAAGTAACCTCAATCCAGCTTTGAAGATTGGTGAAGGAGGATATGGAAGTATATTTAAAGGTGTCCTGCGTCACACTGAGGTGGCTATAAAAGTATTGAACCCCAACAGCACCCAAGGACCCTGTGAGTTTCAACAAGAGGTTGAGGTATTGGGAAAGTTAAGGCATCCTAATCTTATCACACTTATAGGAGCCTGCCCAGAATCATGGACACTTGTCTATGAGTATTTACCTAATGGAAGCCTTGAAGATCGTCTCAACTGCAAGGACAATACGCTCCCATTATCATGGCAAACTCGGATTCGAATTGCTACAGAACTATGTTCTGCTCTCATTATTCTCCATTCCAATAAACCTCACAGCATAGTGCATGGTGACTTAAAACCCTCAAACATTCTCCTTGATGAAAACCTTGTTAGCAAGCTTAGTGACTTTGGAATCTCTCGTATATTATCTTGTGGTGAGGATACACAGTTTTGGATAACTACTCCAAAGGGAACTTTTGTCTACATTGATCCTGAATTCTTGGCTACAGGTGAACTTACTCCAAAGTCAGATGTTTATTCATTTGGAATCATACTATTAAGATTGATAACAGGGAGACCAGCCTTGGGATTAATGAAAGAAGTGCAATATGCATTAGATGGTGGAAAGTTGAAAACTCTATTGGATCCTTTGGCTGGAGATTGGCCATTTGTGTTGGCTGAACAGTTGGTTGGCTTGGCTTTGAGGTGTTGTGACATGAATAGAAAGAGTAGGCCAGACCTTGATTCAGATGTTTGGAGGATATTGGAACCAATGAGGGCTTCTTGTGAAGGAACAAACAACTTTGGACTAAGTTCTCAAGGGCTTTGTCAACCTCCTTCGTGTTTTATTTGTCCAATCTTCCAGGAAAGTCATGCAAGATCCACATGTGGCTGCAGATGGTTTCACTTATGA 2490 0.408 MFATPQSSCNIGLPGIMTSRREIVEEPNPRVVNDTLYVAVAKDVKDGKSNLIWAIHNSGGKKICILHVHVPAPMIPMMGAKFPPSVPTEREVQAFRETERRDMDKTLDAYLGICQKMGVRAEKLHIEMNCIEEGIVELISQHKIQKLLMGAASYKYHNRRMTDLRSKKATYVCEQAPASCHIQFLCKGFLIHTRDRSLDRGTSPLVQQMPNSEVGHSPPLRSQSISLGQNHCVKLVNPAQESYRSVRSVNDVHRRRIASVSSSERFSSPKNKLGKEVSSDESDGLSRWSPSVCSMCSASGSGEPVLTPNLNSDVSENVLRLNLSGLSSIKEDLHHSSPHSVLDGGMDDTLYDQLEQFMAEAENARRNAYQETVRRMKAEKDATDAIRKIKATAILYNEELKLRKELEEALKKAKEEIDNMRSQIEKVDEELQLALEQKSSLENQMASTELTLKELEQKNMSEADLLENYKNERDDMQMQRDNALREAEELRRKQGETSSANAFQLFSEFSFSEIEEATSNLNPALKIGEGGYGSIFKGVLRHTEVAIKVLNPNSTQGPCEFQQEVEVLGKLRHPNLITLIGACPESWTLVYEYLPNGSLEDRLNCKDNTLPLSWQTRIRIATELCSALIILHSNKPHSIVHGDLKPSNILLDENLVSKLSDFGISRILSCGEDTQFWITTPKGTFVYIDPEFLATGELTPKSDVYSFGIILLRLITGRPALGLMKEVQYALDGGKLKTLLDPLAGDWPFVLAEQLVGLALRCCDMNRKSRPDLDSDVWRILEPMRASCEGTNNFGLSSQGLCQPPSCFICPIFQESHARSTCGCRWFHL* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01491 829 PANTHER OS02G0152300 PROTEIN 36 787 - -
Rops4g01491 829 Pfam Protein kinase domain 526 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01491 829 SUPERFAMILY Protein kinase-like (PK-like) 500 774 IPR011009 -
Rops4g01491 829 Gene3D Phosphorylase Kinase; domain 1 491 593 - -
Rops4g01491 829 Coils Coil 351 379 - -
Rops4g01491 829 MobiDBLite consensus disorder prediction 257 285 - -
Rops4g01491 829 ProSiteProfiles Protein kinase domain profile. 521 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01491 829 SMART serkin_6 521 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01491 829 Coils Coil 396 493 - -
Rops4g01491 829 Gene3D Transferase(Phosphotransferase) domain 1 594 794 - -
Rops4g01491 829 FunFam receptor-like protein kinase FERONIA 485 593 - -
Rops4g01491 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Rops4g01491 829 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 55 159 - -
Rops4g01491 829 MobiDBLite consensus disorder prediction 201 221 - -
Rops4g01491 829 CDD STK_N 35 188 - -
Rops4g01491 829 ProSitePatterns Protein kinases ATP-binding region signature. 527 548 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01491 Rops-Chr4 37692664 37703651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01491 23 815 U-box Gene Family AT2G45910 50.126 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Rops4g01491 Pkinase 8.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01491 - - gmx:100781596 1105.51