Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01488 ATGACAAAGAAGTCCCAAAGACGCCCTGTGCGGTATGAGAAAGATAAATCAGGCTGCATGTGGGGTTTCATTAGTATGTTTGATTTTCGCCATGGTCACACAACTCGGAAGTTGATTGCAGATAAGAGGCGAAGCAGCAAACATGCTGTTGGTGTTGGACATTCTAAGAACAAGGTTGAGATGTTAAGCGACATGGATGAAGTTTGTCAAGGCAGTTTTGAGAATGGAGAGAGTAAAAGACCAACAGTGAGAGCTGCTGCTAATAAGCTTAGTGTGAAGAAACTCATAGAAGAAGAGATGTTCTTAGACCAGAATGCAATGAAGGATATAGATAATGTTGAAGTAGAATCAAAGGATTCCAGGTTAAGGCGTGAAGTTTTCCAGAAGTTAGAGTCCAAAAGAAAAAAGAAATCTTGTGAGAAAAACCATGATATCACCGATGATTCAAATTCGGATGCAACCTTGAAATCTGAAATCTCACATCATCAGCATTCGAGGAAGCAATCTAAAGATCTGGATAAGATAATTGAAGAGTTTTGTCATCTAAAAGATGTTTGTTCCATGATGCATGGTAACAATGGAGAAGTAGACATTCATGCACAATCAAACCAGAAGCATGATATTTCTGAAAATAATGCAAGAGATGCAATTCGTGAATTTGTGAATCAAATGATATTGAATGGCAAAGATCTGGCAGAAGCTAGAAAATTCCTTTGCTCCCATGAACTTATGGAAGCACTTCAGCTTATAAGTTCCGATAAGGAATTGTTTCTTACATTTCTGCAAAACCCAGATTCATTTTTATTGAAATGTGTTCAAGAGTATGGGAATTCTCAGGGGACAAATGACAAAGAATGTAGTTGTGTTACTGGTTCCAACTTCTCTGAACAAGATCATGGAAATCTGGAACAAATTAAGGAGATTGTCAACCACAAGAAACATAACTTTTTCAGGAAAAAGGTGAAGTCTCAATCAAAAAGTTCAACAAATGAAAATGGAAGCACTGAAATTTCAAATAAAATTGTTCTTCTGAAGCCTGGACCTATGGGCTTGCAAAATTCTGAAACTAGAAGCAACCTTGCCTCATCCCTTGATTCTCATAATACTGTCAGATACAATGGTCCTTCTGTGAGAGGTAGCTCACATTTTTCTTTTACAGAGATAAAAAAGAAATTAAAGCATGCCATGGGAAGGGAGAGACACGGAAACCTTGAAGGGATCTCAAAAAAGCACCCCGCTGAATGTAAAAATAAGGGGACTAGTGGCAAAGCCATTGGTAAAGACAATATTGGAATGAGATCTCCTAATAAAGATCATTTCTTCATTGAAAAAATTGCAAGACCTAGTGGTGCTATGAAAGGAGACAAGACTGGTGCATATAAAGATTCTGACTTGATTGTGGAACATAAAAAGGGTATTCATCCCAAACAAGGGGTTTCAAACTTGTATATTGAGGCTAAGAAACATCTTTGTGAGATGGTAGGTAATGGAGATGAGAACATAGACTTATCAAGTAGGCAGATGTCCAAAACTCTTGGGAGAATACTATCTCTCCCCGACTATAACTTTTCTCCCCTTGGAAGTCCCGGAAGGGATTGGGAGCAACATTTTGTGACAGCACAGAGAAGATTTTCTACTTCAGATAAAATTTCAGAGGCTAATAAGGATAACTTGTCCCCCAAGCAATCAACCTCCATTGGTCATTTGGATCAGGAAACATACAATTCAGAGAAGCAGTCAAGCATTTGTGAAGAAAGCTCTAATAATAAAGTTCAAGAAATCAAGTCAGACTTTAATTTCTCAGATGACCTTAATCGTGTAGATAAAGTGGAGAACTGCAGTCCTGTGAGAGATGAGATAGTTACTGAAGGTGATGTAGAATCTGTAAAAGAGATAAATATTTTGGAATCTTCCTCAGAACCAGTTGGCCTTAGTGCAGGAAAGGAGGACCAAAACTATGATATCTCAGAAATTCCTGATAGTGCAAGTTGTTCTCAATGCTTGAAGCAGGATGTAACAGAAGAAAACCAACCATCATCTCCACAGTCATCCCCCTCTCACTCTTCCATCACAAAGAAAACTAAAGAGCTAGAAAGTGTTACAGATGTATCTGGGCGGCCCAGCCCTGTGTCTGTTCTTGATATACCATTCTTAGAGGATGATGTCAGTCCTGGGAACTCCAGATGTCAACCTGTTGAAGTACCAGTACAGCCACTACATATTCAATTTGAAGAACAAGATTCTTCACCAGTAAATCAAATCAATAGAGCAAAATATTGTATTGAAGAAAGTGAGTTGATATATGACTACATTAAAGCAATCTTGCAAGCCTCTGGATTGACTCAAGATCAACTGTTGATGAAATGTCTTTCCTCAGACAAGATACTAGATCCTTCCTTGTTTGATCAGGTAGAGTTCTTATCAAACCAGCCTTGCCTTGATAAGAAGCTTATATATGAATCTATCAATGAAGTTCTCATGGAGGTTTGTTGTAATCACTTTGGGGCCTCACCTTGGGTATGGTTTGTCAATCCTAGCATAAGGCTAACTCAAGATATGAAAAAGATAATTCTCAAGGTGTGGGAAGGAGTGTGCTGGCATTTCCTTCACTTGTCCTCACCACACACATTGGACAAAATTGTTAGGAAAGACATGGAAAAAAGTGGAGGATGGATGGACCTTAGATTTGAAGCTGAAACAGTTGGTTTTGAAATGAGTGAAGCCATTCTTGCAGAACTGATGGAAGATACAATATTAAGTTGTGTAGGCAAAAGTCCAGAGAGTGAATATTCTCAGCTTCAATTTGAGTCTAAGGACAACAATAACAGCTCCAATGTGTAA 2841 0.384 MTKKSQRRPVRYEKDKSGCMWGFISMFDFRHGHTTRKLIADKRRSSKHAVGVGHSKNKVEMLSDMDEVCQGSFENGESKRPTVRAAANKLSVKKLIEEEMFLDQNAMKDIDNVEVESKDSRLRREVFQKLESKRKKKSCEKNHDITDDSNSDATLKSEISHHQHSRKQSKDLDKIIEEFCHLKDVCSMMHGNNGEVDIHAQSNQKHDISENNARDAIREFVNQMILNGKDLAEARKFLCSHELMEALQLISSDKELFLTFLQNPDSFLLKCVQEYGNSQGTNDKECSCVTGSNFSEQDHGNLEQIKEIVNHKKHNFFRKKVKSQSKSSTNENGSTEISNKIVLLKPGPMGLQNSETRSNLASSLDSHNTVRYNGPSVRGSSHFSFTEIKKKLKHAMGRERHGNLEGISKKHPAECKNKGTSGKAIGKDNIGMRSPNKDHFFIEKIARPSGAMKGDKTGAYKDSDLIVEHKKGIHPKQGVSNLYIEAKKHLCEMVGNGDENIDLSSRQMSKTLGRILSLPDYNFSPLGSPGRDWEQHFVTAQRRFSTSDKISEANKDNLSPKQSTSIGHLDQETYNSEKQSSICEESSNNKVQEIKSDFNFSDDLNRVDKVENCSPVRDEIVTEGDVESVKEINILESSSEPVGLSAGKEDQNYDISEIPDSASCSQCLKQDVTEENQPSSPQSSPSHSSITKKTKELESVTDVSGRPSPVSVLDIPFLEDDVSPGNSRCQPVEVPVQPLHIQFEEQDSSPVNQINRAKYCIEESELIYDYIKAILQASGLTQDQLLMKCLSSDKILDPSLFDQVEFLSNQPCLDKKLIYESINEVLMEVCCNHFGASPWVWFVNPSIRLTQDMKKIILKVWEGVCWHFLHLSSPHTLDKIVRKDMEKSGGWMDLRFEAETVGFEMSEAILAELMEDTILSCVGKSPESEYSQLQFESKDNNNSSNV* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01488 946 MobiDBLite consensus disorder prediction 131 169 - -
Rops4g01488 946 MobiDBLite consensus disorder prediction 409 430 - -
Rops4g01488 946 MobiDBLite consensus disorder prediction 669 690 - -
Rops4g01488 946 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 921 - -
Rops4g01488 946 MobiDBLite consensus disorder prediction 669 707 - -
Rops4g01488 946 MobiDBLite consensus disorder prediction 544 588 - -
Rops4g01488 946 Pfam Protein of unknown function (DUF3741) 222 266 IPR022212 -
Rops4g01488 946 Pfam Domain of unknown function (DUF4378) 769 916 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01488 Rops-Chr4 37630834 37637492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01488 1 906 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.878 5.65e-116 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01488 - - lja:Lj3g3v2330870.1 1374.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01488 4 37630834 37637492 Rops4g01488 4 37630834 37637492 ECH
Rops8g01145 8 24147102 24153516 Rops4g01488 4 37630834 37637492 PCT