Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01482 ATGCAGAGCCATTTACTGTTGATTGTTGAAATTAAACAACTAAGGTTTGGTGGTGACATCTTAGAGCTAGCAGGGATGGCTACTGGGAGTCCAAAGCATGAGAAGACGCATAAGAACCTAAACACACAGCTAGCTGTTGCAGTAAGAAGTATTCAGTGGAGCTATGGGATTTTCTGGGCACCTTCAACTAGTGAAGAAAGAGTACTACACTGGAGGGAGGGCTACTATAATGGAGACATAAAGACAAGGAAGACAATTCAAACAATGGAAACTAAGGCTGATAAAATGGGCCTGCAGAGGAGTGAGCAACTGAGAGAGTTATACAAGTTTCTACTTGTAGGTGAAGCTGACCCTCAAACTAAAAGGCCTTCTGCTGCATTATCTCCAGAGGATCTCTCAGATTCAGAGTGGTATTACTTGGTTTGCATGTCCTTTGAATTCAACACCAACCAAAGTTTGCCTGGAAGAGCACTAGAAATTGGTGACACAGTCTGGTTGTGCAATGCTCAACATGCAGATAGTAAAGTTTTCTCTCGTTCTTTGCTAGCAAAGAGTGCATCAATTCAGACTGTGGTGTGTTTTCCCTATCTGGGAGGTGTTATTGAGATAGGCACAACTGAACTGGTGTCTGAGGATCCTAATCTAATTCAACATGTGAAGGCATGCTTCTTAGAAATCTCAAAGCCTATTTGCTCTGATAAATCTTCCTCTTCCCATAATAAACCAAGTGATGACAAATATCCAACATGCACTAAAGGTGGCCAAGGGATATTAGATACAATGGCTTTGGAGAACTCATGTTCCCTTGTAGAAGAAGTCAAATTTCATCAATATCCTGTCAAGGAATTACAAGGTGATAACAATGAAGATTGTGACATTGATGCTTTTTCTGTTGGTTGTGACCACTATTGCCACATGGATGAATCCATGATAGAGGGGATCAATGGTGGGTCTTCTCAAGTTCATTTTGTAAATGATGATGCCTTAATCAATGGTGCCTTAGATTCCCCTAGTTCTTGTGATTGTATGTCTGAAGCTTCTGAGAACCAAAGTAAGGATCCTAAGAATGTAAGGGAATTTCAAGATTGCAATCACTCAAAACTAAGCTCCTTGGATATTGGAGTTGATCAGGACTTGCACTTCACAATAACTCTTAGTGCTATTCTGGAAAATTCATCAACTTTGAGACAAAATCCATATGCTAGTGACTCAAATTGCAAATCTAGTTTTGTGAAATGGAAGATAGGAGGAATTTCTGAAAGGAAGAGGCCACGGTTGCACCAAAGCATGTTAAAGAAGATTTTGTTCAATGTCCCCTTTATGCACAGAAGTTTCTCCTCTCTCAAATCACAAAAAGAAAATGACAGAAAAAAATGGACCAGTAAATTGGAAAATGCAGCTAATTTCATGGGAAATGTCTTCTCTGATAAAAAAAGAGAAACTAGAAACTTTCAGGTTCTCAAATCAGTGGCTCCTCCTTCTATAAGTGAGGTGGAGAAGATTTCAATTCTTGGGGGCACAATTAAATACTTGAAAGAGCTTGAGTCAAGAGTGGAAGAACTAGAATCTTACATGGGCATGGCAGATTCTGAAGCAAGAACCAGAAGAAAATGCCCAGATGTGCTAGAGCAGATATCAGATAACTATGGTACCAGAAAGATTTGCATGGGAATGAAACCTAGGATAAACAAGAGGAAGGCTTGTGATATCAATGAGATAGACACAGAGCTAGACAGAATTGTTTCTGAAGAAGCTAAGCCATGGGATGTGAAAGTCAACAAGAAGGAGCAGGAGGTTCTGATTGAGATGAAATGTCCTTACAGGGAATACATACTGTATGATATCATGGATGCCATAAACAACCTGCATTTAGATGCACACACAGTTGAGTCATCAACAATTGATGGTGTTCTCATATTGACACTTAAATCTAAGTTTCGAGGAGCAGCAACTGCACCAATGGGGATGATCAAACAAGCACTCTGGAAAGTGTCTGGAAATATTTGA 2007 0.3981 MQSHLLLIVEIKQLRFGGDILELAGMATGSPKHEKTHKNLNTQLAVAVRSIQWSYGIFWAPSTSEERVLHWREGYYNGDIKTRKTIQTMETKADKMGLQRSEQLRELYKFLLVGEADPQTKRPSAALSPEDLSDSEWYYLVCMSFEFNTNQSLPGRALEIGDTVWLCNAQHADSKVFSRSLLAKSASIQTVVCFPYLGGVIEIGTTELVSEDPNLIQHVKACFLEISKPICSDKSSSSHNKPSDDKYPTCTKGGQGILDTMALENSCSLVEEVKFHQYPVKELQGDNNEDCDIDAFSVGCDHYCHMDESMIEGINGGSSQVHFVNDDALINGALDSPSSCDCMSEASENQSKDPKNVREFQDCNHSKLSSLDIGVDQDLHFTITLSAILENSSTLRQNPYASDSNCKSSFVKWKIGGISERKRPRLHQSMLKKILFNVPFMHRSFSSLKSQKENDRKKWTSKLENAANFMGNVFSDKKRETRNFQVLKSVAPPSISEVEKISILGGTIKYLKELESRVEELESYMGMADSEARTRRKCPDVLEQISDNYGTRKICMGMKPRINKRKACDINEIDTELDRIVSEEAKPWDVKVNKKEQEVLIEMKCPYREYILYDIMDAINNLHLDAHTVESSTIDGVLILTLKSKFRGAATAPMGMIKQALWKVSGNI* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01482 668 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 40 223 IPR025610 -
Rops4g01482 668 PANTHER TRANSCRIPTION FACTOR TT8 34 666 - -
Rops4g01482 668 Coils Coil 511 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01482 Rops-Chr4 37543990 37549980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01482 26 665 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 40.691 7.31e-134 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01482 - - gmx:100798122 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01482 4 37543990 37549980 Rops4g01482 4 37543990 37549980 ECH